RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 IQANK1A0A1B0GTG1 560 aa16.4■□□□□ 0.22
YIPF3-208ENST00000490447 FAM159BA6NKW6 160 aa16.4■□□□□ 0.22
YIPF3-208ENST00000490447 OR10H2O60403 315 aa16.4■□□□□ 0.22
YIPF3-208ENST00000490447 KERAO60938 352 aa16.4■□□□□ 0.22
YIPF3-208ENST00000490447 IGKV3-11P04433 115 aa16.4■□□□□ 0.22
YIPF3-208ENST00000490447 GSTA2P09210 222 aa16.4■□□□□ 0.22
YIPF3-208ENST00000490447 ALOX15P16050 662 aaPredicted RBP16.4■□□□□ 0.22
YIPF3-208ENST00000490447 IGLV3-21P80748 117 aaPredicted RBP16.4■□□□□ 0.22
YIPF3-208ENST00000490447 TNFRSF17Q02223 184 aa16.4■□□□□ 0.22
YIPF3-208ENST00000490447 SLC25A35Q3KQZ1 300 aa16.4■□□□□ 0.22
YIPF3-208ENST00000490447 DEPDC1Q5TB30 811 aa16.4■□□□□ 0.22
YIPF3-208ENST00000490447 RTL6Q6ICC9 239 aa16.4■□□□□ 0.22
YIPF3-208ENST00000490447 GRHL2Q6ISB3 625 aa16.4■□□□□ 0.22
YIPF3-208ENST00000490447 CYS1Q717R9 158 aa16.4■□□□□ 0.22
YIPF3-208ENST00000490447 GPR180Q86V85 440 aa16.4■□□□□ 0.22
YIPF3-208ENST00000490447 PAQR8Q8TEZ7 354 aa16.4■□□□□ 0.22
YIPF3-208ENST00000490447 JSRP1Q96MG2 331 aaPredicted RBP16.4■□□□□ 0.22
YIPF3-208ENST00000490447 PELOQ9BRX2 385 aaKnown RBP16.4■□□□□ 0.22
YIPF3-208ENST00000490447 SORBS1Q9BX66 1292 aaKnown RBP16.4■□□□□ 0.22
YIPF3-208ENST00000490447 ZNF703Q9H7S9 590 aaPredicted RBP16.4■□□□□ 0.22
YIPF3-208ENST00000490447 ZFP64Q9NPA5 681 aa16.4■□□□□ 0.22
YIPF3-208ENST00000490447 SEMA4BQ9NPR2 832 aaPredicted RBP16.4■□□□□ 0.22
YIPF3-208ENST00000490447 WHRNQ9P202 907 aa16.4■□□□□ 0.22
YIPF3-208ENST00000490447 ZNF407Q9C0G0 2248 aa16.39■□□□□ 0.21
YIPF3-208ENST00000490447 HCFC1P51610 2035 aa16.39■□□□□ 0.21
YIPF3-208ENST00000490447 SYCE1LA8MT33 242 aa16.39■□□□□ 0.21
YIPF3-208ENST00000490447 UBXN8O00124 270 aa16.39■□□□□ 0.21
YIPF3-208ENST00000490447 LTA4HP09960 611 aaKnown RBP16.39■□□□□ 0.21
YIPF3-208ENST00000490447 SERPINB3P29508 390 aa16.39■□□□□ 0.21
YIPF3-208ENST00000490447 DNAJA1P31689 397 aaKnown RBP16.39■□□□□ 0.21
YIPF3-208ENST00000490447 MRPS25P82663 173 aaKnown RBP16.39■□□□□ 0.21
YIPF3-208ENST00000490447 ZNF791Q3KP31 576 aaPredicted RBP16.39■□□□□ 0.21
YIPF3-208ENST00000490447 RNF111Q6ZNA4 994 aa16.39■□□□□ 0.21
YIPF3-208ENST00000490447 MAATS1Q7Z4T9 603 aa16.39■□□□□ 0.21
YIPF3-208ENST00000490447 ISCA2Q86U28 154 aa16.39■□□□□ 0.21
YIPF3-208ENST00000490447 ST13P4Q8IZP2 240 aaPredicted RBP16.39■□□□□ 0.21
YIPF3-208ENST00000490447 FBXW8Q8N3Y1 598 aa16.39■□□□□ 0.21
YIPF3-208ENST00000490447 PPM1NQ8N819 430 aa16.39■□□□□ 0.21
YIPF3-208ENST00000490447 HUS1BQ8NHY5 278 aa16.39■□□□□ 0.21
YIPF3-208ENST00000490447 UBTD2Q8WUN7 234 aa16.39■□□□□ 0.21
YIPF3-208ENST00000490447 TRIM44Q96DX7 344 aaPredicted RBP16.39■□□□□ 0.21
YIPF3-208ENST00000490447 ERP44Q9BS26 406 aa16.39■□□□□ 0.21
YIPF3-208ENST00000490447 RYDENQ9NUL5 291 aaKnown RBP16.39■□□□□ 0.21
YIPF3-208ENST00000490447 CNIH4Q9P003 139 aa16.39■□□□□ 0.21
YIPF3-208ENST00000490447 SETD2Q9BYW2 2564 aaPredicted RBP16.39■□□□□ 0.21
YIPF3-208ENST00000490447 PHF3Q92576 2039 aaKnown RBP16.38■□□□□ 0.21
YIPF3-208ENST00000490447 FAM187AA6NFU0 413 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 HRKO00198 91 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 PLPP1O14494 284 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 SLC35E2BP0CK96 405 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 CRABP2P29373 138 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 ADH7P40394 386 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 PIK3CBP42338 1070 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 HERVK_113P63132 956 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 ERVK-8P63133 956 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 ZNF267Q14586 743 aaPredicted RBP16.38■□□□□ 0.21
YIPF3-208ENST00000490447 RIPPLY2Q5TAB7 128 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 C18orf63Q68DL7 685 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 ARSKQ6UWY0 536 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 CMC1Q7Z7K0 106 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 ZCCHC7Q8N3Z6 543 aaKnown RBP16.38■□□□□ 0.21
YIPF3-208ENST00000490447 TEX9Q8N6V9 391 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 REPS1Q96D71 796 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 LRRC46Q96FV0 321 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 ATOH8Q96SQ7 321 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 MTERF1Q99551 399 aaKnown RBP16.38■□□□□ 0.21
YIPF3-208ENST00000490447 DOHHQ9BU89 302 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 ERVK-6Q9BXR3 956 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 ACTR8Q9H981 624 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 WDR41Q9HAD4 459 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 SH2D2AQ9NP31 389 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 DMRT3Q9NQL9 472 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 LYARQ9NX58 379 aaKnown RBP16.38■□□□□ 0.21
YIPF3-208ENST00000490447 QPCTLQ9NXS2 382 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 DNAJB12Q9NXW2 375 aaKnown RBP16.38■□□□□ 0.21
YIPF3-208ENST00000490447 SPRR3Q9UBC9 169 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 ERVK-19Q9WJR5 959 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 L3MBTL1Q9Y468 752 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 PCDHGB3Q9Y5G1 929 aa16.38■□□□□ 0.21
YIPF3-208ENST00000490447 INTS1Q8N201 2190 aaKnown RBP16.38■□□□□ 0.21
YIPF3-208ENST00000490447 NF1P21359 2839 aa16.37■□□□□ 0.21
YIPF3-208ENST00000490447 OR6C76A6NM76 312 aa16.37■□□□□ 0.21
YIPF3-208ENST00000490447 PRKRAO75569 313 aaKnown RBP16.37■□□□□ 0.21
YIPF3-208ENST00000490447 NADKO95544 446 aaPredicted RBP16.37■□□□□ 0.21
YIPF3-208ENST00000490447 FBXO45P0C2W1 286 aa16.37■□□□□ 0.21
YIPF3-208ENST00000490447 ENDOUP21128 410 aaKnown RBP16.37■□□□□ 0.21
YIPF3-208ENST00000490447 STX2P32856 288 aa16.37■□□□□ 0.21
YIPF3-208ENST00000490447 GMPRP36959 345 aa16.37■□□□□ 0.21
YIPF3-208ENST00000490447 PEX19P40855 299 aa16.37■□□□□ 0.21
YIPF3-208ENST00000490447 ARFIP1P53367 373 aa16.37■□□□□ 0.21
YIPF3-208ENST00000490447 PCDH1Q08174 1060 aa16.37■□□□□ 0.21
YIPF3-208ENST00000490447 SPRED3Q2MJR0 410 aa16.37■□□□□ 0.21
YIPF3-208ENST00000490447 KBTBD12Q3ZCT8 623 aa16.37■□□□□ 0.21
YIPF3-208ENST00000490447 LIPJQ5W064 366 aa16.37■□□□□ 0.21
YIPF3-208ENST00000490447 CYP20A1Q6UW02 462 aa16.37■□□□□ 0.21
YIPF3-208ENST00000490447 DGAT2L6Q6ZPD8 337 aa16.37■□□□□ 0.21
YIPF3-208ENST00000490447 LIX1LQ8IVB5 337 aa16.37■□□□□ 0.21
YIPF3-208ENST00000490447 ZZZ3Q8IYH5 903 aa16.37■□□□□ 0.21
YIPF3-208ENST00000490447 TAGAPQ8N103 731 aa16.37■□□□□ 0.21
YIPF3-208ENST00000490447 RNF175Q8N4F7 328 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms