RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 H2AFYO75367 372 aaKnown RBP7.52□□□□□ -1.21
USP39-216ENST00000490193 TRIM3O75382 744 aaPredicted RBP7.52□□□□□ -1.21
USP39-216ENST00000490193 SCELO95171 688 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 LY6G6DO95868 133 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 C1QAP02745 245 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 FBXO45P0C2W1 286 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 ZNF37AP17032 561 aaPredicted RBP7.52□□□□□ -1.21
USP39-216ENST00000490193 CERS1P27544 350 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 OPRM1P35372 400 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 PLA2G16P53816 162 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 ASPHQ12797 758 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 DUSP8Q13202 625 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 SLBPQ14493 270 aaKnown RBP eCLIP7.52□□□□□ -1.21
USP39-216ENST00000490193 NHSL2Q5HYW2 709 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 SPANXN3Q5MJ09 141 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 TBCELQ5QJ74 424 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 FAM45BPQ6NSW5 357 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 TTC27Q6P3X3 843 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 PRSS57Q6UWY2 283 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 CAPN12Q6ZSI9 719 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 CXXC5Q7LFL8 322 aaKnown RBP7.52□□□□□ -1.21
USP39-216ENST00000490193 VN1R5Q7Z5H4 357 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 C9orf40Q8IXQ3 194 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 KRT78Q8N1N4 520 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 RASGEF1CQ8N431 466 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 LIX1Q8N485 282 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 FAM45AQ8TCE6 357 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 ISL2Q96A47 359 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 ANKRD9Q96BM1 317 aaPredicted RBP7.52□□□□□ -1.21
USP39-216ENST00000490193 CAPZA3Q96KX2 299 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 DACH2Q96NX9 599 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 TIMP4Q99727 224 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 NAT9Q9BTE0 207 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 CAPS2Q9BXY5 557 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 ROGDIQ9GZN7 287 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 UBQLN3Q9H347 655 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 ZNF395Q9H8N7 513 aaPredicted RBP7.52□□□□□ -1.21
USP39-216ENST00000490193 COPS7BQ9H9Q2 264 aaPredicted RBP7.52□□□□□ -1.21
USP39-216ENST00000490193 PRDM7Q9NQW5 492 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 GPRC5BQ9NZH0 403 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 CNOT11Q9UKZ1 510 aaKnown RBP7.52□□□□□ -1.21
USP39-216ENST00000490193 VWA7Q9Y334 891 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 OARD1Q9Y530 152 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 ARID1AO14497 2285 aa7.52□□□□□ -1.21
USP39-216ENST00000490193 RAI1Q7Z5J4 1906 aaPredicted RBP7.51□□□□□ -1.21
USP39-216ENST00000490193 C15orf38-AP3S2A0A0A6YYH1 394 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 ANKDD1BA6NHY2 528 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 CDC7O00311 574 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 LDB3O75112 727 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 WDR47O94967 919 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 HPNP05981 417 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 COX7A2P14406 83 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 TNNI3P19429 210 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 CTSSP25774 331 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 STT3AP46977 705 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 KCNC1P48547 511 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 TRPC1P48995 793 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 PGGT1BP53609 377 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 WNT3P56703 355 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 TGM3Q08188 693 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 BIKQ13323 160 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 NTRK2Q16620 822 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 CYP1B1Q16678 543 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 Q5PR19 223 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 TEDDM1Q5T9Z0 273 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 PRAMEF20Q5VT98 475 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 VASNQ6EMK4 673 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 ZNF662Q6ZS27 426 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 SYDE1Q6ZW31 735 aaPredicted RBP7.51□□□□□ -1.21
USP39-216ENST00000490193 PPIL6Q8IXY8 311 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 SIMC1Q8NDZ2 872 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 SRFBP1Q8NEF9 429 aaKnown RBP7.51□□□□□ -1.21
USP39-216ENST00000490193 OR10G3Q8NGC4 313 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 LINC01560Q8TB33 94 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 SREK1Q8WXA9 508 aaKnown RBP7.51□□□□□ -1.21
USP39-216ENST00000490193 CCT6BQ92526 530 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 WDR34Q96EX3 536 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 CERS2Q96G23 380 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 SENP5Q96HI0 755 aaPredicted RBP7.51□□□□□ -1.21
USP39-216ENST00000490193 FBXL20Q96IG2 436 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 ART5Q96L15 291 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 ZNF597Q96LX8 424 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 KCNC2Q96PR1 638 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 WDR83Q9BRX9 315 aaKnown RBP7.51□□□□□ -1.21
USP39-216ENST00000490193 YIPF4Q9BSR8 244 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 DOHHQ9BU89 302 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 CALHM2Q9HA72 323 aa7.51□□□□□ -1.21
USP39-216ENST00000490193 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.51□□□□□ -1.21
USP39-216ENST00000490193 ZNF490Q9ULM2 529 aaPredicted RBP7.51□□□□□ -1.21
USP39-216ENST00000490193 MYOCOSA0A1B0GUC4 107 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 EEF1E1-BLOC1S5C9J1V9 151 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 EEF1E1O43324 174 aaKnown RBP7.5□□□□□ -1.21
USP39-216ENST00000490193 FGF17O60258 216 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 PRAMEF4O60810 478 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 ATP5A1P25705 553 aaKnown RBP7.5□□□□□ -1.21
USP39-216ENST00000490193 GDF1P27539 372 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 SERPINB3P29508 390 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 GGT5P36269 586 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 GDF5P43026 501 aa7.5□□□□□ -1.21
USP39-216ENST00000490193 CDK9P50750 372 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms