RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 SLC17A1Q14916 467 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 TRADDQ15628 312 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 LCE1FQ5T754 118 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 EMBQ6PCB8 327 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 Q6ZRG5 221 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 TOM1L2Q6ZVM7 507 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 ZNF410Q86VK4 478 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 ZSCAN30Q86W11 494 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 CHCHD4Q8N4Q1 142 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 ST7LQ8TDW4 575 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 C16orf58Q96GQ5 468 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 RUNDC3BQ96NL0 473 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 NAP1L3Q99457 506 aaPredicted RBP4.5□□□□□ -1.69
VPS26A-206ENST00000489794 HSD17B14Q9BPX1 270 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 DCTN5Q9BTE1 182 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 TRPV6Q9H1D0 765 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 SLC26A1Q9H2B4 701 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 ADNPQ9H2P0 1102 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 PRMT8Q9NR22 394 aaPredicted RBP4.5□□□□□ -1.69
VPS26A-206ENST00000489794 CWC25Q9NXE8 425 aaPredicted RBP4.5□□□□□ -1.69
VPS26A-206ENST00000489794 TECRQ9NZ01 308 aaKnown RBP4.5□□□□□ -1.69
VPS26A-206ENST00000489794 VPS54Q9P1Q0 977 aa4.5□□□□□ -1.69
VPS26A-206ENST00000489794 GON4LQ3T8J9 2241 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 IGHV3-16A0A0C4DH30 117 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 C5orf51A6NDU8 294 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 RNF212BA8MTL3 300 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 MEI4A8MW99 385 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 SHISA9B4DS77 424 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 DDX39AO00148 427 aaKnown RBP4.49□□□□□ -1.69
VPS26A-206ENST00000489794 TSPAN2O60636 221 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 GMNNO75496 209 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 HPP00738 406 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 APRTP07741 180 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 CAPN2P17655 700 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 PDE7AQ13946 482 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 GK2Q14410 553 aaPredicted RBP4.49□□□□□ -1.69
VPS26A-206ENST00000489794 P2RY14Q15391 338 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 SHROOM1Q2M3G4 852 aaPredicted RBP4.49□□□□□ -1.69
VPS26A-206ENST00000489794 CCDC92Q53HC0 331 aaPredicted RBP4.49□□□□□ -1.69
VPS26A-206ENST00000489794 TCTEX1D4Q5JR98 221 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 REP15Q6BDI9 236 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 CDC20BQ86Y33 519 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 SLC39A11Q8N1S5 342 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 FGFRL1Q8N441 504 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.49□□□□□ -1.69
VPS26A-206ENST00000489794 SAMD12Q8N8I0 201 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 OR4L1Q8NH43 312 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 FBXO25Q8TCJ0 367 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 KRT35Q92764 455 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 ATP6V0A1Q93050 837 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 CABS1Q96KC9 395 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 RPGRIP1Q96KN7 1286 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 CCDC28BQ9BUN5 200 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 PNNQ9H307 717 aaKnown RBP4.49□□□□□ -1.69
VPS26A-206ENST00000489794 NT5DC2Q9H857 520 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 DDX28Q9NUL7 540 aaKnown RBP4.49□□□□□ -1.69
VPS26A-206ENST00000489794 AKAP7Q9P0M2 348 aaPredicted RBP4.49□□□□□ -1.69
VPS26A-206ENST00000489794 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.49□□□□□ -1.69
VPS26A-206ENST00000489794 CPQQ9Y646 472 aa4.49□□□□□ -1.69
VPS26A-206ENST00000489794 HCFC1P51610 2035 aa4.48□□□□□ -1.69
VPS26A-206ENST00000489794 TRBV2A0A0J9YWF9 115 aa4.48□□□□□ -1.69
VPS26A-206ENST00000489794 YJEFN3A6XGL0 299 aa4.48□□□□□ -1.69
VPS26A-206ENST00000489794 EEF2KO00418 725 aaKnown RBP4.48□□□□□ -1.69
VPS26A-206ENST00000489794 ARPC1BO15143 372 aaKnown RBP4.48□□□□□ -1.69
VPS26A-206ENST00000489794 ATP6V1G1O75348 118 aa4.48□□□□□ -1.69
VPS26A-206ENST00000489794 PPP2R1BP30154 601 aa4.48□□□□□ -1.69
VPS26A-206ENST00000489794 GSK3BP49841 420 aa4.48□□□□□ -1.69
VPS26A-206ENST00000489794 CCZ1BP86790 482 aa4.48□□□□□ -1.69
VPS26A-206ENST00000489794 CCZ1P86791 482 aaPredicted RBP4.48□□□□□ -1.69
VPS26A-206ENST00000489794 UBXN1Q04323 297 aa4.48□□□□□ -1.69
VPS26A-206ENST00000489794 ACTN3Q08043 901 aaPredicted RBP4.48□□□□□ -1.69
VPS26A-206ENST00000489794 KRT31Q15323 416 aa4.48□□□□□ -1.69
VPS26A-206ENST00000489794 WSCD2Q2TBF2 565 aa4.48□□□□□ -1.69
VPS26A-206ENST00000489794 RTL6Q6ICC9 239 aa4.48□□□□□ -1.69
VPS26A-206ENST00000489794 OR1K1Q8NGR3 316 aa4.48□□□□□ -1.69
VPS26A-206ENST00000489794 RNASE8Q8TDE3 154 aaKnown RBP4.48□□□□□ -1.69
VPS26A-206ENST00000489794 DCLRE1BQ9H816 532 aa4.48□□□□□ -1.69
VPS26A-206ENST00000489794 A0A1B0GTH9 108 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 FCER2P06734 321 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 B4GALT1P15291 398 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 FOSL2P15408 326 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 AREGP15514 252 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 GATA2P23769 480 aaPredicted RBP4.47□□□□□ -1.69
VPS26A-206ENST00000489794 CALML3P27482 149 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 ID1P41134 155 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 DSCR10P59022 87 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 C17orf67Q0P5P2 114 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 PPP2R5CQ13362 524 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 MSLNQ13421 630 aaPredicted RBP4.47□□□□□ -1.69
VPS26A-206ENST00000489794 EMC2Q15006 297 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 HAGHQ16775 308 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 ZNF506Q5JVG8 444 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 HIST2H2AA3Q6FI13 130 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 ARMCX5Q6P1M9 558 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 TIPARPQ7Z3E1 657 aaKnown RBP4.47□□□□□ -1.69
VPS26A-206ENST00000489794 MARCH9Q86YJ5 346 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 SERPINA12Q8IW75 414 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 PARP8Q8N3A8 854 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 OR4A16Q8NH70 328 aa4.47□□□□□ -1.69
VPS26A-206ENST00000489794 RDH11Q8TC12 318 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms