RNA–Protein interactions for RNA: ENST00000489705.2

HNRNPU-211, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-211ENST00000489705 MLXQ9UH92 298 aa3.38□□□□□ -1.87
HNRNPU-211ENST00000489705 PRAMEF12O95522 483 aa3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 P0C879 139 aa3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 ELK1P19419 428 aa3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 CASTP20810 708 aaKnown RBP3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 GLRA1P23415 457 aa3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 GDF1P27539 372 aa3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 CTNNA1P35221 906 aaKnown RBP3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 GP5P40197 560 aa3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 ROR1Q01973 937 aa3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 AKAP17AQ02040 695 aaKnown RBP3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 ARHGAP1Q07960 439 aa3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 OVGP1Q12889 678 aa3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 PPP1R3AQ16821 1122 aa3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 MICAQ29983 383 aa3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 SNRNP48Q6IEG0 339 aaKnown RBP3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 METTL23Q86XA0 190 aa3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 VSIG1Q86XK7 387 aa3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 U2AF1L4Q8WU68 220 aaKnown RBP3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 UBLCP1Q8WVY7 318 aaPredicted RBP3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 FAM122AQ96E09 287 aa3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 MAGEB18Q96M61 343 aa3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 GBP5Q96PP8 586 aa3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 INTS14Q96SY0 518 aa3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 EDEM3Q9BZQ6 932 aa3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 ARGLU1Q9NWB6 273 aaPredicted RBP3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 PLEK2Q9NYT0 353 aa3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 GIMAP2Q9UG22 337 aa3.37□□□□□ -1.87
HNRNPU-211ENST00000489705 ATP6AP2A0A1C7CYW4 349 aa3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 SYT7O43581 403 aa3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 MAGEA9P43362 315 aa3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 WNT4P56705 351 aa3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 RIPK4P57078 832 aa3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 RPL27P61353 136 aaKnown RBP3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 GABPAQ06546 454 aa3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 SCN1BQ07699 218 aa3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 C9orf129Q5T035 196 aaKnown RBP3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 WDR25Q64LD2 544 aaPredicted RBP3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 CAPN13Q6MZZ7 669 aaPredicted RBP3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 GCNT7Q6ZNI0 430 aa3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 THNSL1Q8IYQ7 743 aa3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 GPR137CQ8N3F9 429 aa3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 NUS1Q96E22 293 aa3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 WWP1Q9H0M0 922 aa3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 ALDH8A1Q9H2A2 487 aaPredicted RBP3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 CUEDC2Q9H467 287 aa3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 ZCCHC17Q9NP64 241 aaKnown RBP3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 VPS18Q9P253 973 aa3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 NTNG1Q9Y2I2 539 aa3.36□□□□□ -1.87
HNRNPU-211ENST00000489705 CFAP65Q6ZU64 1925 aaKnown RBP3.35□□□□□ -1.87
HNRNPU-211ENST00000489705 FAM149AA5PLN7 773 aa3.35□□□□□ -1.87
HNRNPU-211ENST00000489705 EPOPA6NHQ4 379 aa3.35□□□□□ -1.87
HNRNPU-211ENST00000489705 GPAA1O43292 621 aa3.35□□□□□ -1.87
HNRNPU-211ENST00000489705 DUSP11O75319 330 aaKnown RBP3.35□□□□□ -1.87
HNRNPU-211ENST00000489705 KRT83P78385 493 aa3.35□□□□□ -1.87
HNRNPU-211ENST00000489705 CXCL6P80162 114 aa3.35□□□□□ -1.87
HNRNPU-211ENST00000489705 PAX2Q02962 417 aa3.35□□□□□ -1.87
HNRNPU-211ENST00000489705 ACKR1Q16570 336 aa3.35□□□□□ -1.87
HNRNPU-211ENST00000489705 HECTD3Q5T447 861 aa3.35□□□□□ -1.87
HNRNPU-211ENST00000489705 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
HNRNPU-211ENST00000489705 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
HNRNPU-211ENST00000489705 MSANTD1Q6ZTZ1 278 aa3.35□□□□□ -1.87
HNRNPU-211ENST00000489705 CCDC197Q8NCU1 140 aa3.35□□□□□ -1.87
HNRNPU-211ENST00000489705 VMP1Q96GC9 406 aa3.35□□□□□ -1.87
HNRNPU-211ENST00000489705 SSX3Q99909 188 aa3.35□□□□□ -1.87
HNRNPU-211ENST00000489705 SPAG8Q99932 426 aaPredicted RBP3.35□□□□□ -1.87
HNRNPU-211ENST00000489705 ADPGKQ9BRR6 497 aa3.35□□□□□ -1.87
HNRNPU-211ENST00000489705 ZNF446Q9NWS9 450 aa3.35□□□□□ -1.87
HNRNPU-211ENST00000489705 ERVK-19Q9WJR5 959 aa3.35□□□□□ -1.87
HNRNPU-211ENST00000489705 IGHV3-35A0A0C4DH35 117 aa3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 A0A0U1RQG5 324 aaPredicted RBP3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 GJB5O95377 273 aa3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 HSPA4LO95757 839 aa3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 SCG2P13521 617 aa3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 CCND3P30281 292 aaPredicted RBP3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 ID1P41134 155 aa3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 SLC12A3P55017 1021 aa3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 TGIF1Q15583 401 aa3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 C1QTNF12Q5T7M4 302 aa3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 DDI2Q5TDH0 399 aa3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 TRAT1Q6PIZ9 186 aa3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 PET117Q6UWS5 81 aa3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 ADGRD2Q7Z7M1 963 aa3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 SIAH3Q8IW03 269 aa3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 SIX6OS1Q8N1H7 587 aa3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 KIAA0895Q8NCT3 520 aa3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 S1PR3Q99500 378 aa3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 NUSAP1Q9BXS6 441 aaKnown RBP3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 RAI14Q9P0K7 980 aa3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 EIF3KQ9UBQ5 218 aaKnown RBP3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 SEC14L4Q9UDX3 406 aa3.34□□□□□ -1.87
HNRNPU-211ENST00000489705 MAGEB16A2A368 324 aa3.33□□□□□ -1.88
HNRNPU-211ENST00000489705 SDR42E2A6NKP2 422 aa3.33□□□□□ -1.88
HNRNPU-211ENST00000489705 PSMA7O14818 248 aa3.33□□□□□ -1.88
HNRNPU-211ENST00000489705 CTDSPLO15194 276 aa3.33□□□□□ -1.88
HNRNPU-211ENST00000489705 CSO75390 466 aaKnown RBP3.33□□□□□ -1.88
HNRNPU-211ENST00000489705 SLC34A1Q06495 639 aa3.33□□□□□ -1.88
HNRNPU-211ENST00000489705 ODF2Q5BJF6 829 aa3.33□□□□□ -1.88
HNRNPU-211ENST00000489705 IGFL3Q6UXB1 125 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms