RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 TUBA3EQ6PEY2 450 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 ATCAYQ86WG3 371 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 OR5L2Q8NGL0 311 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 OR8K3Q8NH51 312 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 SLC2A12Q8TD20 617 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 PPWD1Q96BP3 646 aaKnown RBP16.16■□□□□ 0.18
MDC1-206ENST00000489540 APIPQ96GX9 242 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 SENP5Q96HI0 755 aaPredicted RBP16.16■□□□□ 0.18
MDC1-206ENST00000489540 ART5Q96L15 291 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 TNFRSF12AQ9NP84 129 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 COPS7AQ9UBW8 275 aa16.16■□□□□ 0.18
MDC1-206ENST00000489540 ZNF223Q9UK11 482 aaPredicted RBP16.16■□□□□ 0.18
MDC1-206ENST00000489540 CNTRLQ7Z7A1 2325 aa16.15■□□□□ 0.18
MDC1-206ENST00000489540 SLC28A1O00337 649 aa16.15■□□□□ 0.18
MDC1-206ENST00000489540 PCDH7O60245 1069 aa16.15■□□□□ 0.18
MDC1-206ENST00000489540 PRAMEF2O60811 474 aa16.15■□□□□ 0.18
MDC1-206ENST00000489540 VPS4BO75351 444 aa16.15■□□□□ 0.18
MDC1-206ENST00000489540 CHEK2O96017 543 aa16.15■□□□□ 0.18
MDC1-206ENST00000489540 GSTM5P46439 218 aa16.15■□□□□ 0.18
MDC1-206ENST00000489540 OC90Q02509 493 aaPredicted RBP16.15■□□□□ 0.18
MDC1-206ENST00000489540 KCNC4Q03721 635 aa16.15■□□□□ 0.18
MDC1-206ENST00000489540 BTKQ06187 659 aa16.15■□□□□ 0.18
MDC1-206ENST00000489540 NUDCD3Q8IVD9 361 aa16.15■□□□□ 0.18
MDC1-206ENST00000489540 CLYBLQ8N0X4 340 aa16.15■□□□□ 0.18
MDC1-206ENST00000489540 GALNT11Q8NCW6 608 aa16.15■□□□□ 0.18
MDC1-206ENST00000489540 RIT1Q92963 219 aa16.15■□□□□ 0.18
MDC1-206ENST00000489540 UCN3Q969E3 161 aa16.15■□□□□ 0.18
MDC1-206ENST00000489540 C11orf24Q96F05 449 aaPredicted RBP16.15■□□□□ 0.18
MDC1-206ENST00000489540 METTL2AQ96IZ6 378 aaKnown RBP16.15■□□□□ 0.18
MDC1-206ENST00000489540 AGPAT4Q9NRZ5 378 aa16.15■□□□□ 0.18
MDC1-206ENST00000489540 MAP10Q9P2G4 905 aa16.15■□□□□ 0.18
MDC1-206ENST00000489540 VPS4AQ9UN37 437 aa16.15■□□□□ 0.18
MDC1-206ENST00000489540 PCDHGB6Q9Y5F9 930 aa16.15■□□□□ 0.18
MDC1-206ENST00000489540 GNG14A0A1W2PPG7 69 aa16.14■□□□□ 0.17
MDC1-206ENST00000489540 PYCARD-AS1I3L0S3 204 aa16.14■□□□□ 0.17
MDC1-206ENST00000489540 RSL1D1O76021 490 aaKnown RBP16.14■□□□□ 0.17
MDC1-206ENST00000489540 DRD2P14416 443 aa16.14■□□□□ 0.17
MDC1-206ENST00000489540 TRHRP34981 398 aaPredicted RBP16.14■□□□□ 0.17
MDC1-206ENST00000489540 SERPINB4P48594 390 aa16.14■□□□□ 0.17
MDC1-206ENST00000489540 CYB561P49447 251 aa16.14■□□□□ 0.17
MDC1-206ENST00000489540 XKP51811 444 aa16.14■□□□□ 0.17
MDC1-206ENST00000489540 OR1C1Q15619 314 aa16.14■□□□□ 0.17
MDC1-206ENST00000489540 INAQ16352 499 aa16.14■□□□□ 0.17
MDC1-206ENST00000489540 PRR30Q53SZ7 412 aaPredicted RBP16.14■□□□□ 0.17
MDC1-206ENST00000489540 CLEC6AQ6EIG7 209 aa16.14■□□□□ 0.17
MDC1-206ENST00000489540 SLC48A1Q6P1K1 146 aa16.14■□□□□ 0.17
MDC1-206ENST00000489540 RNF165Q6ZSG1 346 aa16.14■□□□□ 0.17
MDC1-206ENST00000489540 FAM76AQ8TAV0 307 aa16.14■□□□□ 0.17
MDC1-206ENST00000489540 ZNF721Q8TF20 911 aa16.14■□□□□ 0.17
MDC1-206ENST00000489540 THAP3Q8WTV1 239 aaPredicted RBP16.14■□□□□ 0.17
MDC1-206ENST00000489540 TRIM45Q9H8W5 580 aaPredicted RBP16.14■□□□□ 0.17
MDC1-206ENST00000489540 KCNK9Q9NPC2 374 aa16.14■□□□□ 0.17
MDC1-206ENST00000489540 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.14■□□□□ 0.17
MDC1-206ENST00000489540 CES1P1Q9UKY3 287 aa16.14■□□□□ 0.17
MDC1-206ENST00000489540 YARS2Q9Y2Z4 477 aaKnown RBP16.14■□□□□ 0.17
MDC1-206ENST00000489540 TRAF6Q9Y4K3 522 aa16.14■□□□□ 0.17
MDC1-206ENST00000489540 GOLGA6L10A6NI86 522 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 BIRC5O15392 142 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 RGS14O43566 566 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 ZWINTO95229 277 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 IGKV3-11P04433 115 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 CD46P15529 392 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 PORP16435 677 aaPredicted RBP16.13■□□□□ 0.17
MDC1-206ENST00000489540 TIA1P31483 386 aaKnown RBP eCLIP16.13■□□□□ 0.17
MDC1-206ENST00000489540 HLCSP50747 726 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 RAE1P78406 368 aaKnown RBP16.13■□□□□ 0.17
MDC1-206ENST00000489540 HEPACAMQ14CZ8 416 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 SPRED3Q2MJR0 410 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 ZNF766Q5HY98 468 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 SPINK14Q6IE38 97 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 OR6Y1Q8NGX8 325 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 PPP1R14CQ8TAE6 165 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 C19orf60Q96EN9 201 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 FBXL20Q96IG2 436 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 BARD1Q99728 777 aaKnown RBP16.13■□□□□ 0.17
MDC1-206ENST00000489540 ASF1BQ9NVP2 202 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 ANKRD10Q9NXR5 420 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 LRFN1Q9P244 771 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 MYOTQ9UBF9 498 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 DLGAP4Q9Y2H0 992 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 WBP11Q9Y2W2 641 aaKnown RBP16.13■□□□□ 0.17
MDC1-206ENST00000489540 CCL27Q9Y4X3 112 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 SCN2AQ99250 2005 aa16.13■□□□□ 0.17
MDC1-206ENST00000489540 NPIPB8E9PQR5 432 aa16.12■□□□□ 0.17
MDC1-206ENST00000489540 PRKNO60260 465 aaPredicted RBP16.12■□□□□ 0.17
MDC1-206ENST00000489540 ITGA10O75578 1167 aa16.12■□□□□ 0.17
MDC1-206ENST00000489540 CHRNGP07510 517 aa16.12■□□□□ 0.17
MDC1-206ENST00000489540 ANXA4P09525 319 aaPredicted RBP16.12■□□□□ 0.17
MDC1-206ENST00000489540 CPMP14384 443 aa16.12■□□□□ 0.17
MDC1-206ENST00000489540 RNF4P78317 190 aa16.12■□□□□ 0.17
MDC1-206ENST00000489540 ZNF267Q14586 743 aaPredicted RBP16.12■□□□□ 0.17
MDC1-206ENST00000489540 KANK2Q63ZY3 851 aa16.12■□□□□ 0.17
MDC1-206ENST00000489540 DGAT2L6Q6ZPD8 337 aa16.12■□□□□ 0.17
MDC1-206ENST00000489540 ZCCHC23Q6ZST2 131 aa16.12■□□□□ 0.17
MDC1-206ENST00000489540 TMEM156Q8N614 296 aa16.12■□□□□ 0.17
MDC1-206ENST00000489540 ZNF321PQ8N8H1 164 aa16.12■□□□□ 0.17
MDC1-206ENST00000489540 MDS2Q8NDY4 140 aa16.12■□□□□ 0.17
MDC1-206ENST00000489540 C16orf78Q8WTQ4 265 aa16.12■□□□□ 0.17
MDC1-206ENST00000489540 C5orf34Q96MH7 638 aa16.12■□□□□ 0.17
MDC1-206ENST00000489540 CNPPD1Q9BV87 410 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms