RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 C12orf71A8MTZ7 269 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 PAK4O96013 591 aaPredicted RBP16.87■□□□□ 0.29
NPHP4-209ENST00000489180 MPC1LP0DKB6 136 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 MYF6P23409 242 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 PYCR1P32322 319 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 TMEM156Q8N614 296 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 DPCDQ9BVM2 203 aaPredicted RBP16.87■□□□□ 0.29
NPHP4-209ENST00000489180 NUAK1O60285 661 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 C7P10643 843 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 AGXTP21549 392 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 GCGRP47871 477 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 ZNF41P51814 821 aaPredicted RBP16.87■□□□□ 0.29
NPHP4-209ENST00000489180 ZNF805Q5CZA5 627 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 HACD2Q6Y1H2 254 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 C6orf120Q7Z4R8 191 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 IRF7Q92985 503 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 MYRFLQ96LU7 910 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 FEVQ99581 238 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 CMKLR1Q99788 373 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 C16orf70Q9BSU1 422 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 IGSF5Q9NSI5 407 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 STUB1Q9UNE7 303 aa16.87■□□□□ 0.29
NPHP4-209ENST00000489180 SH3PXD2BA1X283 911 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 SLC33A1O00400 549 aaPredicted RBP16.86■□□□□ 0.29
NPHP4-209ENST00000489180 C12orf40Q86WS4 652 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 CCDC28AQ8IWP9 274 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 FAM86B1Q8N7N1 296 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 NETO1Q8TDF5 533 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 TRUB1Q8WWH5 349 aaKnown RBP16.86■□□□□ 0.29
NPHP4-209ENST00000489180 THAP4Q8WY91 577 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 GPR62Q9BZJ7 368 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 TMEM185BQ9H7F4 350 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 SFTPBP07988 381 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 C15orf39Q6ZRI6 1047 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 SLC9B2Q86UD5 537 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 HS3ST5Q8IZT8 346 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 HUS1BQ8NHY5 278 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 MOAP1Q96BY2 351 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 MMABQ96EY8 250 aaPredicted RBP16.86■□□□□ 0.29
NPHP4-209ENST00000489180 C7orf34Q96L11 122 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 FIZ1Q96SL8 496 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 BOCQ9BWV1 1114 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 TMEM168Q9H0V1 697 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 IL21RQ9HBE5 538 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 SRA1Q9HD15 236 aaKnown RBP16.86■□□□□ 0.29
NPHP4-209ENST00000489180 SACM1LQ9NTJ5 587 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 TAS2R3Q9NYW6 316 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 ANHXE9PGG2 379 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 SCAMP2O15127 329 aaKnown RBP16.86■□□□□ 0.29
NPHP4-209ENST00000489180 SOD2P04179 222 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 HOXD8P13378 290 aaPredicted RBP16.86■□□□□ 0.29
NPHP4-209ENST00000489180 AK4P27144 223 aaPredicted RBP16.86■□□□□ 0.29
NPHP4-209ENST00000489180 GSTM2P28161 218 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 CLRN1P58418 232 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 NFATC3Q12968 1075 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 GTDC1Q4AE62 458 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 HAGHLQ6PII5 290 aaPredicted RBP16.86■□□□□ 0.29
NPHP4-209ENST00000489180 SLC5A7Q9GZV3 580 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 HRASLS2Q9NWW9 162 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 ACTL7AQ9Y615 435 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 IFT172Q9UG01 1749 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 CAPN15O75808 1086 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 FADDQ13158 208 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 BEND4Q6ZU67 534 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 AMIGO3Q86WK7 504 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 TRAM1L1Q8N609 369 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 MAELQ96JY0 434 aaKnown RBP16.86■□□□□ 0.29
NPHP4-209ENST00000489180 WASHC1A8K0Z3 465 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 H2AFB2P0C5Z0 115 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 NR0B1P51843 470 aaKnown RBP16.86■□□□□ 0.29
NPHP4-209ENST00000489180 ERVPABLB-1P60509 514 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 ITPRIPL2Q3MIP1 535 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 WASH2PQ6VEQ5 465 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 TMPRSS12Q86WS5 348 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 OR52P1PQ8NH57 321 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 RPLP0P6Q8NHW5 317 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 NDNFQ8TB73 568 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 TLR9Q9NR96 1032 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 GPR52Q9Y2T5 361 aa16.86■□□□□ 0.29
NPHP4-209ENST00000489180 PARP4Q9UKK3 1724 aaKnown RBP16.85■□□□□ 0.29
NPHP4-209ENST00000489180 SLC16A5O15375 505 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 GALTP07902 379 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 RHCEP18577 417 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 EMC10Q5UCC4 262 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 LCN8Q6JVE9 175 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 HMBOX1Q6NT76 420 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 ZNF283Q8N7M2 679 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 NRG4Q8WWG1 115 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 INPP5KQ9BT40 448 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 MGAT4CQ9UBM8 478 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 IL20RAQ9UHF4 553 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 A0A0U1RQS6 177 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 RBBP9O75884 186 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 GABARAPL2P60520 117 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 DEFB134Q4QY38 66 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 ZNF789Q5FWF6 425 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 GLT8D1Q68CQ7 371 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 P4HA3Q7Z4N8 544 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 ISCA2Q86U28 154 aa16.85■□□□□ 0.29
NPHP4-209ENST00000489180 KBTBD6Q86V97 674 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms