RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 TRMT10CQ7L0Y3 403 aaKnown RBP12.99□□□□□ -0.33
VTI1A-206ENST00000489142 FGD2Q7Z6J4 655 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 MILR1Q7Z6M3 343 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 SPPL2CQ8IUH8 684 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 CHERPQ8IWX8 916 aaKnown RBP12.99□□□□□ -0.33
VTI1A-206ENST00000489142 C9orf40Q8IXQ3 194 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 TRPC4APQ8TEL6 797 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 TANKQ92844 425 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 RBM18Q96H35 190 aaKnown RBP12.99□□□□□ -0.33
VTI1A-206ENST00000489142 SENP5Q96HI0 755 aaPredicted RBP12.99□□□□□ -0.33
VTI1A-206ENST00000489142 SERPINI1Q99574 410 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 ERVK-6Q9BXR3 956 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 TXLNGYQ9BZA5 131 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 ELOVL6Q9H5J4 265 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 TIMMDC1Q9NPL8 285 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 LYARQ9NX58 379 aaKnown RBP12.99□□□□□ -0.33
VTI1A-206ENST00000489142 MS4A12Q9NXJ0 267 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 SUCOQ9UBS9 1254 aaKnown RBP12.99□□□□□ -0.33
VTI1A-206ENST00000489142 TBK1Q9UHD2 729 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 SLC12A4Q9UP95 1085 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 ERVK-19Q9WJR5 959 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 NCKAP5O14513 1909 aa12.99□□□□□ -0.33
VTI1A-206ENST00000489142 TEX15Q9BXT5 2789 aa12.98□□□□□ -0.33
VTI1A-206ENST00000489142 NCOA6Q14686 2063 aaPredicted RBP12.98□□□□□ -0.33
VTI1A-206ENST00000489142 SYNDIG1LA6NDD5 238 aa12.98□□□□□ -0.33
VTI1A-206ENST00000489142 PGRMC2O15173 223 aa12.98□□□□□ -0.33
VTI1A-206ENST00000489142 OR10H2O60403 315 aa12.98□□□□□ -0.33
VTI1A-206ENST00000489142 PDE9AO76083 593 aa12.98□□□□□ -0.33
VTI1A-206ENST00000489142 OR4F21O95013 312 aa12.98□□□□□ -0.33
VTI1A-206ENST00000489142 MLYCDO95822 493 aa12.98□□□□□ -0.33
VTI1A-206ENST00000489142 PDYNP01213 254 aa12.98□□□□□ -0.33
VTI1A-206ENST00000489142 ESRRAP11474 423 aaPredicted RBP12.98□□□□□ -0.33
VTI1A-206ENST00000489142 GRNP28799 593 aaKnown RBP12.98□□□□□ -0.33
VTI1A-206ENST00000489142 ADORA2A-AS1P86434 159 aa12.98□□□□□ -0.33
VTI1A-206ENST00000489142 ZNF267Q14586 743 aaPredicted RBP12.98□□□□□ -0.33
VTI1A-206ENST00000489142 LGSNQ5TDP6 509 aa12.98□□□□□ -0.33
VTI1A-206ENST00000489142 MRGPRGQ86SM5 289 aa12.98□□□□□ -0.33
VTI1A-206ENST00000489142 MMP21Q8N119 569 aa12.98□□□□□ -0.33
VTI1A-206ENST00000489142 GHDCQ8N2G8 530 aa12.98□□□□□ -0.33
VTI1A-206ENST00000489142 OR52N2Q8NGI0 321 aa12.98□□□□□ -0.33
VTI1A-206ENST00000489142 TMEM237Q96Q45 408 aa12.98□□□□□ -0.33
VTI1A-206ENST00000489142 GAL3ST4Q96RP7 486 aa12.98□□□□□ -0.33
VTI1A-206ENST00000489142 ZNF225Q9UK10 706 aa12.98□□□□□ -0.33
VTI1A-206ENST00000489142 ZNF835Q9Y2P0 537 aa12.98□□□□□ -0.33
VTI1A-206ENST00000489142 ZNF407Q9C0G0 2248 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 A0A1B0GTH9 108 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 CDK2AP1O14519 115 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 DLX3O60479 287 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 SEMA3DO95025 777 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 LRATO95237 230 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 GPR75O95800 540 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 OTCP00480 354 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 IGKV3-11P04433 115 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 CCL3P10147 92 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 PYGBP11216 843 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 PLGLB1Q02325 96 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.97□□□□□ -0.33
VTI1A-206ENST00000489142 GGTA1PQ4G0N0 100 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 UNC50Q53HI1 259 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 CMPK2Q5EBM0 449 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 CCNYL2Q5T2Q4 361 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 TIFABQ6ZNK6 161 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 CDYL2Q8N8U2 506 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 ZFP62Q8NB50 900 aaPredicted RBP12.97□□□□□ -0.33
VTI1A-206ENST00000489142 POGLUT1Q8NBL1 392 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 OR2M7Q8NG81 312 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 AGAP11Q8TF27 550 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 SELENOMQ8WWX9 145 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 RIT1Q92963 219 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 MTBPQ96DY7 904 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 FBXL20Q96IG2 436 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 PHF12Q96QT6 1004 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 DEFB127Q9H1M4 99 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 PSMC3IPQ9P2W1 217 aaPredicted RBP12.97□□□□□ -0.33
VTI1A-206ENST00000489142 ITPR2Q14571 2701 aa12.97□□□□□ -0.33
VTI1A-206ENST00000489142 IQANK1A0A1B0GTG1 560 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 A0A1W2PPM1 405 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 SMIM23A6NLE4 172 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 DYRK3O43781 588 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 SUPT7LO94864 414 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 NADKO95544 446 aaPredicted RBP12.96□□□□□ -0.33
VTI1A-206ENST00000489142 CLPSP04118 112 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 SHBGP04278 402 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 TAC1P20366 129 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 SSTR4P31391 388 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 HSD17B3P37058 310 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 SLCO1A2P46721 670 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 DNASE1L1P49184 302 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 ARFIP1P53367 373 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 PPIAP62937 165 aaKnown RBP12.96□□□□□ -0.33
VTI1A-206ENST00000489142 CLCQ05315 142 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 GALNT1Q10472 559 aaPredicted RBP12.96□□□□□ -0.33
VTI1A-206ENST00000489142 CDSNQ15517 529 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 ZNF678Q5SXM1 525 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 NDUFAF5Q5TEU4 345 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 OR52E8Q6IFG1 317 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 FAM180BQ6P0A1 224 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 RNF111Q6ZNA4 994 aa12.96□□□□□ -0.33
VTI1A-206ENST00000489142 Q6ZPB1 254 aaPredicted RBP12.96□□□□□ -0.33
VTI1A-206ENST00000489142 RTL4Q6ZR62 310 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms