RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 ZFP28Q8NHY6 868 aa10.82□□□□□ -0.68
CMSS1-205ENST00000489081 PSMA8Q8TAA3 256 aa10.82□□□□□ -0.68
CMSS1-205ENST00000489081 NETO1Q8TDF5 533 aa10.82□□□□□ -0.68
CMSS1-205ENST00000489081 ANKRD9Q96BM1 317 aaPredicted RBP10.82□□□□□ -0.68
CMSS1-205ENST00000489081 TBC1D20Q96BZ9 403 aa10.82□□□□□ -0.68
CMSS1-205ENST00000489081 AURKBQ96GD4 344 aaPredicted RBP10.82□□□□□ -0.68
CMSS1-205ENST00000489081 LIN37Q96GY3 246 aaPredicted RBP10.82□□□□□ -0.68
CMSS1-205ENST00000489081 DEPDC7Q96QD5 511 aa10.82□□□□□ -0.68
CMSS1-205ENST00000489081 CTRCQ99895 268 aa10.82□□□□□ -0.68
CMSS1-205ENST00000489081 RBCK1Q9BYM8 510 aa10.82□□□□□ -0.68
CMSS1-205ENST00000489081 TRIM8Q9BZR9 551 aa10.82□□□□□ -0.68
CMSS1-205ENST00000489081 ZNF304Q9HCX3 659 aa10.82□□□□□ -0.68
CMSS1-205ENST00000489081 NEUROD4Q9HD90 331 aa10.82□□□□□ -0.68
CMSS1-205ENST00000489081 SIRT3Q9NTG7 399 aaPredicted RBP10.82□□□□□ -0.68
CMSS1-205ENST00000489081 TAS2R9Q9NYW1 312 aa10.82□□□□□ -0.68
CMSS1-205ENST00000489081 ADA2Q9NZK5 511 aa10.82□□□□□ -0.68
CMSS1-205ENST00000489081 ZNF282Q9UDV7 671 aaPredicted RBP10.82□□□□□ -0.68
CMSS1-205ENST00000489081 CD300AQ9UGN4 299 aa10.82□□□□□ -0.68
CMSS1-205ENST00000489081 PACSIN3Q9UKS6 424 aa10.82□□□□□ -0.68
CMSS1-205ENST00000489081 VPS4AQ9UN37 437 aa10.82□□□□□ -0.68
CMSS1-205ENST00000489081 MRPS33Q9Y291 106 aaKnown RBP10.82□□□□□ -0.68
CMSS1-205ENST00000489081 RRP15Q9Y3B9 282 aaKnown RBP10.82□□□□□ -0.68
CMSS1-205ENST00000489081 LOXL2Q9Y4K0 774 aa10.82□□□□□ -0.68
CMSS1-205ENST00000489081 GMEB1Q9Y692 573 aa10.82□□□□□ -0.68
CMSS1-205ENST00000489081 SPAARA0A1B0GVQ0 90 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 PRORSD1PA6NEY8 169 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 CLDN4O14493 209 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 NVLO15381 856 aaKnown RBP10.81□□□□□ -0.68
CMSS1-205ENST00000489081 B4GALT2O60909 372 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 LDB3O75112 727 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 GPR75O95800 540 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 ONECUT2O95948 504 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 C1QCP02747 245 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 NTRK1P04629 796 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 FHP07954 510 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 NUDT7P0C024 238 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 FTH1P19P0C7X4 201 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 CPMP14384 443 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 PPP2R1BP30154 601 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 MPIP34949 423 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 RORAP35398 523 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 ETV5P41161 510 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 XCR1P46094 333 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 XKP51811 444 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 NCBP2P52298 156 aaKnown RBP eCLIP10.81□□□□□ -0.68
CMSS1-205ENST00000489081 EEFSECP57772 596 aaKnown RBP10.81□□□□□ -0.68
CMSS1-205ENST00000489081 MTPNP58546 118 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 ID2Q02363 134 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 HSPB3Q12988 150 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 ERV3-1Q14264 604 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 SAMD4BQ5PRF9 694 aaKnown RBP10.81□□□□□ -0.68
CMSS1-205ENST00000489081 ZNF385CQ66K41 422 aaPredicted RBP10.81□□□□□ -0.68
CMSS1-205ENST00000489081 RAB11FIP2Q7L804 512 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 GPR155Q7Z3F1 870 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 HPS6Q86YV9 775 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 OR4N5Q8IXE1 308 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 CCDC116Q8IYX3 515 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 LRRC25Q8N386 305 aaPredicted RBP10.81□□□□□ -0.68
CMSS1-205ENST00000489081 FBXW8Q8N3Y1 598 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 ZFP90Q8TF47 636 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 COL26A1Q96A83 441 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 CLIP3Q96DZ5 547 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 RNF31Q96EP0 1072 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 OR1F2PQ96R84 312 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 SH3GL1Q99961 368 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 IKZF5Q9H5V7 419 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 CXorf36Q9H7Y0 433 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 PRTFDC1Q9NRG1 225 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 LANCL2Q9NS86 450 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 SLC22A11Q9NSA0 550 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 SLC39A1Q9NY26 324 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 TRPC4Q9UBN4 977 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 SLC7A8Q9UHI5 535 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 L3MBTL1Q9Y468 752 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 FRYLO94915 3013 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 SPTBP11277 2137 aa10.81□□□□□ -0.68
CMSS1-205ENST00000489081 EP300Q09472 2414 aaPredicted RBP10.8□□□□□ -0.68
CMSS1-205ENST00000489081 SCN3AQ9NY46 2000 aa10.8□□□□□ -0.68
CMSS1-205ENST00000489081 TGFBR3LH3BV60 316 aa10.8□□□□□ -0.68
CMSS1-205ENST00000489081 CLIC1O00299 241 aa10.8□□□□□ -0.68
CMSS1-205ENST00000489081 CTNSO60931 367 aa10.8□□□□□ -0.68
CMSS1-205ENST00000489081 CPNE3O75131 537 aaKnown RBP10.8□□□□□ -0.68
CMSS1-205ENST00000489081 JRKO75564 520 aa10.8□□□□□ -0.68
CMSS1-205ENST00000489081 SORBS2O94875 1100 aaKnown RBP10.8□□□□□ -0.68
CMSS1-205ENST00000489081 BMP10O95393 424 aa10.8□□□□□ -0.68
CMSS1-205ENST00000489081 HSD17B1P14061 328 aa10.8□□□□□ -0.68
CMSS1-205ENST00000489081 PORP16435 677 aaPredicted RBP10.8□□□□□ -0.68
CMSS1-205ENST00000489081 ZNF28P17035 718 aa10.8□□□□□ -0.68
CMSS1-205ENST00000489081 ITIH1P19827 911 aa10.8□□□□□ -0.68
CMSS1-205ENST00000489081 IL10P22301 178 aa10.8□□□□□ -0.68
CMSS1-205ENST00000489081 UQCRC2P22695 453 aa10.8□□□□□ -0.68
CMSS1-205ENST00000489081 SOAT1P35610 550 aa10.8□□□□□ -0.68
CMSS1-205ENST00000489081 RAB15P59190 212 aa10.8□□□□□ -0.68
CMSS1-205ENST00000489081 IGLV3-21P80748 117 aaPredicted RBP10.8□□□□□ -0.68
CMSS1-205ENST00000489081 SPATS1Q496A3 300 aa10.8□□□□□ -0.68
CMSS1-205ENST00000489081 NKAIN1Q4KMZ8 207 aa10.8□□□□□ -0.68
CMSS1-205ENST00000489081 CPZQ66K79 652 aa10.8□□□□□ -0.68
CMSS1-205ENST00000489081 CEACAM20Q6UY09 585 aa10.8□□□□□ -0.68
CMSS1-205ENST00000489081 ZC3H7AQ8IWR0 971 aaKnown RBP10.8□□□□□ -0.68
CMSS1-205ENST00000489081 CLEC4FQ8N1N0 589 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms