RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 ACSM2AQ08AH3 577 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 MRPL49Q13405 166 aaKnown RBP13.29□□□□□ -0.28
BRCA1-218ENST00000489037 UBAP2LQ14157 1087 aaKnown RBP13.29□□□□□ -0.28
BRCA1-218ENST00000489037 MAPKAPK3Q16644 382 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 KRT71Q3SY84 523 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 SPIN4Q56A73 249 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 TCHHL1Q5QJ38 904 aaPredicted RBP13.29□□□□□ -0.28
BRCA1-218ENST00000489037 NDUFAF5Q5TEU4 345 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 ACSM2BQ68CK6 577 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 FRMD7Q6ZUT3 714 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 ARMC10Q8N2F6 343 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 C1orf52Q8N6N3 182 aaKnown RBP13.29□□□□□ -0.28
BRCA1-218ENST00000489037 BANPQ8N9N5 519 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 MDS2Q8NDY4 140 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 OR8K3Q8NH51 312 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 ASB15Q8WXK1 588 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 RIT1Q92963 219 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 PPWD1Q96BP3 646 aaKnown RBP13.29□□□□□ -0.28
BRCA1-218ENST00000489037 SENP5Q96HI0 755 aaPredicted RBP13.29□□□□□ -0.28
BRCA1-218ENST00000489037 SIGLEC12Q96PQ1 595 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 BARD1Q99728 777 aaKnown RBP13.29□□□□□ -0.28
BRCA1-218ENST00000489037 TMEM109Q9BVC6 243 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 C12orf65Q9H3J6 166 aaKnown RBP13.29□□□□□ -0.28
BRCA1-218ENST00000489037 TEX10Q9NXF1 929 aaPredicted RBP13.29□□□□□ -0.28
BRCA1-218ENST00000489037 SENP1Q9P0U3 644 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 ERVK-11Q9UQG0 969 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 TIMM22Q9Y584 194 aa13.29□□□□□ -0.28
BRCA1-218ENST00000489037 HIVEP3Q5T1R4 2406 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 GNG14A0A1W2PPG7 69 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 GOLGA6L10A6NI86 522 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 A8MVJ9 347 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 PGRMC2O15173 223 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 RGS16O15492 202 aaPredicted RBP13.28□□□□□ -0.28
BRCA1-218ENST00000489037 SPAG7O75391 227 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 SLC25A12O75746 678 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 AGFG2O95081 481 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 DDAH2O95865 285 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 SLC35E2P0CK97 266 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 GALNSP34059 522 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 ST13P50502 369 aaKnown RBP13.28□□□□□ -0.28
BRCA1-218ENST00000489037 RNF4P78317 190 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 BTKQ06187 659 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 TBL3Q12788 808 aaKnown RBP13.28□□□□□ -0.28
BRCA1-218ENST00000489037 ZNF267Q14586 743 aaPredicted RBP13.28□□□□□ -0.28
BRCA1-218ENST00000489037 EIF2S3LQ2VIR3 472 aaKnown RBP13.28□□□□□ -0.28
BRCA1-218ENST00000489037 SPDYAQ5MJ70 313 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 CROCCP2Q86T23 111 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 C10orf107Q8IVU9 208 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 GPALPP1Q8IXQ4 340 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 CYP4Z2PQ8N1L4 340 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 ZNF721Q8TF20 911 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 CHTF18Q8WVB6 975 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 NR4A3Q92570 626 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 SCMH1Q96GD3 660 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 FAM111AQ96PZ2 611 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 TRMOQ9BU70 441 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 CNPPD1Q9BV87 410 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 RRAGDQ9NQL2 400 aaPredicted RBP13.28□□□□□ -0.28
BRCA1-218ENST00000489037 HPF1Q9NWY4 346 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 MYOTQ9UBF9 498 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 MCM8Q9UJA3 840 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 ZNF223Q9UK11 482 aaPredicted RBP13.28□□□□□ -0.28
BRCA1-218ENST00000489037 KLF13Q9Y2Y9 288 aaPredicted RBP13.28□□□□□ -0.28
BRCA1-218ENST00000489037 PCDHA9Q9Y5H5 950 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 POLEQ07864 2286 aa13.28□□□□□ -0.28
BRCA1-218ENST00000489037 EML6Q6ZMW3 1958 aa13.27□□□□□ -0.28
BRCA1-218ENST00000489037 GTF3C1Q12789 2109 aa13.27□□□□□ -0.28
BRCA1-218ENST00000489037 DIDO1Q9BTC0 2240 aaKnown RBP13.27□□□□□ -0.28
BRCA1-218ENST00000489037 SERTM1A2A2V5 107 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 KLRC4-KLRK1H3BQV0 150 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 WWP2O00308 870 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 PCDH7O60245 1069 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 ERLIN1O75477 346 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 OR2J2O76002 312 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 NEURL1O76050 574 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 CHEK2O96017 543 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 UROSP10746 265 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 PORP16435 677 aaPredicted RBP13.27□□□□□ -0.29
BRCA1-218ENST00000489037 ALDH9A1P49189 494 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 HTR6P50406 440 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 XKP51811 444 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 ERVK-8P63133 956 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 GALNT1Q10472 559 aaPredicted RBP13.27□□□□□ -0.29
BRCA1-218ENST00000489037 SPRED3Q2MJR0 410 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 SCIMPQ6UWF3 145 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 RNF111Q6ZNA4 994 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 SLC29A4Q7RTT9 530 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 GALNTL5Q7Z4T8 443 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 TCP10LQ8TDR4 215 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 TM4SF18Q96CE8 201 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 FBXL20Q96IG2 436 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 TAAR6Q96RI8 345 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 KCNA7Q96RP8 456 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 ACPTQ9BZG2 426 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 TRIM45Q9H8W5 580 aaPredicted RBP13.27□□□□□ -0.29
BRCA1-218ENST00000489037 LIN28AQ9H9Z2 209 aaKnown RBP13.27□□□□□ -0.29
BRCA1-218ENST00000489037 EML4Q9HC35 981 aaKnown RBP13.27□□□□□ -0.29
BRCA1-218ENST00000489037 TIMMDC1Q9NPL8 285 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 ERVK-19Q9WJR5 959 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 ZNF780BQ9Y6R6 833 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms