RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 SOHLH2Q9NX45 425 aa7.67□□□□□ -1.18
TRAPPC12-221ENST00000489032 UTP6Q9NYH9 597 aaKnown RBP7.67□□□□□ -1.18
TRAPPC12-221ENST00000489032 TMEM9Q9P0T7 183 aa7.67□□□□□ -1.18
TRAPPC12-221ENST00000489032 CTNNAL1Q9UBT7 734 aa7.67□□□□□ -1.18
TRAPPC12-221ENST00000489032 FETUBQ9UGM5 382 aa7.67□□□□□ -1.18
TRAPPC12-221ENST00000489032 CIDEBQ9UHD4 219 aa7.67□□□□□ -1.18
TRAPPC12-221ENST00000489032 SATB2Q9UPW6 733 aa7.67□□□□□ -1.18
TRAPPC12-221ENST00000489032 ACOT9Q9Y305 439 aa7.67□□□□□ -1.18
TRAPPC12-221ENST00000489032 LOXL2Q9Y4K0 774 aa7.67□□□□□ -1.18
TRAPPC12-221ENST00000489032 ITPR2Q14571 2701 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 SPTBN1Q01082 2364 aaKnown RBP7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 TLN1Q9Y490 2541 aaKnown RBP7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 A0A0J9YY10 115 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 MARCH11A6NNE9 402 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 EFCAB7A8K855 629 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 BTN3A3O00478 584 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 CASC3O15234 703 aaKnown RBP7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 INMTO95050 263 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 ZBTB11O95625 1053 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 ANXA2P07355 339 aaKnown RBP7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 UGT2B7P16662 529 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 MAKP20794 623 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 ELAVL4P26378 380 aaKnown RBP7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 PRDX3P30048 256 aaKnown RBP7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 RPA3P35244 121 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 SLC26A3P40879 764 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 KPNA2P52292 529 aaKnown RBP7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 PDX1P52945 283 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 MAPK10P53779 464 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 PNLIPRP1P54315 467 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 BMPR2Q13873 1038 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 CSHL1Q14406 222 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 C16orf72Q14CZ0 275 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 ZKSCAN8Q15776 578 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 SLC5A12Q1EHB4 618 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 FAM83EQ2M2I3 478 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 CCSMST1Q4G0I0 132 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 PLA1AQ53H76 456 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 SPESP1Q6UW49 350 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 ZNF771Q7L3S4 317 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 TMPRSS9Q7Z410 1059 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 ARHGAP22Q7Z5H3 698 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 CMC1Q7Z7K0 106 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 ADGRF3Q8IZF5 1079 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 C2orf73Q8N5S3 287 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 OR56A3Q8NH54 315 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 HMGCLL1Q8TB92 370 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 N4BP2L2Q92802 583 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 NACC2Q96BF6 587 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 CABS1Q96KC9 395 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 PKP4Q99569 1192 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 MAP3K3Q99759 626 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 EGFL8Q99944 293 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 PCBD2Q9H0N5 130 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 UNKLQ9H9P5 680 aaKnown RBP7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 FANCEQ9HB96 536 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 PDE7BQ9NP56 450 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 ARL15Q9NXU5 204 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 SLC39A1Q9NY26 324 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 VSX1Q9NZR4 365 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 PSMC3IPQ9P2W1 217 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 PISDQ9UG56 409 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 POMT2Q9UKY4 750 aa7.66□□□□□ -1.18
TRAPPC12-221ENST00000489032 A0A096LPK6 155 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 CCDC189A1A4V9 331 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 SLC9B1P1A6NJY1 282 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 CDRT15L2A8MXV6 281 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 B4E171 279 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 TRIM49D1C9J1S8 452 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 POLR1CO15160 346 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 SHOX2O60902 331 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 CDH16O75309 829 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 TNFSF15O95150 251 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 SPDEFO95238 335 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 TSPAN12O95859 305 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 SLC16A8O95907 504 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 SHBGP04278 402 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 C2P06681 752 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 ANXA5P08758 320 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 ITGAMP11215 1152 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 NELFEP18615 380 aaKnown RBP7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 TNFSF4P23510 183 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 CMPK1P30085 196 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 TSPAN7P41732 249 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 HNMTP50135 292 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 PGGT1BP53609 377 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 PRKAG1P54619 331 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 MAGOHP61326 146 aaKnown RBP7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 ACY1Q03154 408 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 FOXM1Q08050 763 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 TP53BP2Q13625 1128 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 E2F2Q14209 437 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 GRB7Q14451 532 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 RASA2Q15283 850 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 FAM209BQ5JX69 171 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 DCAF12Q5T6F0 453 aa7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 UBAP2Q5T6F2 1119 aaKnown RBP7.65□□□□□ -1.18
TRAPPC12-221ENST00000489032 TMEM207Q6UWW9 146 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms