RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 SULF2Q8IWU5 870 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 C9orf40Q8IXQ3 194 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 GPALPP1Q8IXQ4 340 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 ST13P4Q8IZP2 240 aaPredicted RBP16.46■□□□□ 0.23
ITGB1-215ENST00000488494 CDYL2Q8N8U2 506 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 PSD4Q8NDX1 1056 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 OR8K3Q8NH51 312 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 SELENOMQ8WWX9 145 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 UCN3Q969E3 161 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 RELTQ969Z4 430 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 RBM18Q96H35 190 aaKnown RBP16.46■□□□□ 0.23
ITGB1-215ENST00000488494 SENP5Q96HI0 755 aaPredicted RBP16.46■□□□□ 0.23
ITGB1-215ENST00000488494 FBXL20Q96IG2 436 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 PELOQ9BRX2 385 aaKnown RBP16.46■□□□□ 0.23
ITGB1-215ENST00000488494 CNPPD1Q9BV87 410 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 TIMMDC1Q9NPL8 285 aa16.46■□□□□ 0.23
ITGB1-215ENST00000488494 CENPEQ02224 2701 aa16.46■□□□□ 0.22
ITGB1-215ENST00000488494 NAV2Q8IVL1 2488 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 ZGRF1Q86YA3 2104 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 A0A1W2PS29 197 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 TFECO14948 347 aaPredicted RBP16.45■□□□□ 0.22
ITGB1-215ENST00000488494 PEX1O43933 1283 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 GPR75O95800 540 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 IGKV3-11P04433 115 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 GSTA1P08263 222 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 TNFRSF8P28908 595 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 HSD17B3P37058 310 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 CA7P43166 264 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 ERVK-8P63133 956 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 HSF1Q00613 529 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 RASA2Q15283 850 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.45■□□□□ 0.225e-6■□□□□ 10.3
ITGB1-215ENST00000488494 UNC50Q53HI1 259 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 IL20RBQ6UXL0 311 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 GPRIN3Q6ZVF9 776 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 PAGE2Q7Z2X7 111 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 POGLUT1Q8NBL1 392 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 OR5L2Q8NGL0 311 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 ART5Q96L15 291 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 ZNF382Q96SR6 550 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 AHSPQ9NZD4 102 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 TINAGQ9UJW2 476 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 ZNF225Q9UK10 706 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 ADAM29Q9UKF5 820 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 EMCNQ9ULC0 261 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 ERVK-19Q9WJR5 959 aa16.45■□□□□ 0.22
ITGB1-215ENST00000488494 CRYBG3Q68DQ2 2970 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 A0A0G2JMM0 328 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 A0A1W2PPB8 328 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 A0A1W2PPM1 405 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 A0A1W2PRS3 328 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 KIR3DP1A8MWS1 328 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 KLRC4-KLRK1H3BQV0 150 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 MANBAO00462 879 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 PGRMC2O15173 223 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 PTGER1P34995 402 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 MAPK12P53778 367 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 PRKAA2P54646 552 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 CASP6P55212 293 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 GALNT1Q10472 559 aaPredicted RBP16.44■□□□□ 0.22
ITGB1-215ENST00000488494 BIKQ13323 160 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 C3AR1Q16581 482 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 SPRED3Q2MJR0 410 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 KRTCAP3Q53RY4 240 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 CCNYL2Q5T2Q4 361 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 NDUFAF5Q5TEU4 345 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 SLC22A9Q8IVM8 553 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 CNPY4Q8N129 248 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 METTL4Q8N3J2 472 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 MYRIPQ8NFW9 859 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 EPS8L3Q8TE67 593 aaKnown RBP16.44■□□□□ 0.22
ITGB1-215ENST00000488494 RIT1Q92963 219 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 GAL3ST4Q96RP7 486 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 BRF2Q9HAW0 419 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 DEPPQ9NTK1 212 aa16.44■□□□□ 0.22
ITGB1-215ENST00000488494 SUCOQ9UBS9 1254 aaKnown RBP16.44■□□□□ 0.22
ITGB1-215ENST00000488494 G3V3Y1 287 aa16.43■□□□□ 0.22
ITGB1-215ENST00000488494 CCL21O00585 134 aa16.43■□□□□ 0.22
ITGB1-215ENST00000488494 ZNHIT1O43257 154 aa16.43■□□□□ 0.22
ITGB1-215ENST00000488494 ASNA1O43681 348 aa16.43■□□□□ 0.22
ITGB1-215ENST00000488494 ZNF354AO60765 605 aaPredicted RBP16.43■□□□□ 0.22
ITGB1-215ENST00000488494 GLRA3O75311 464 aa16.43■□□□□ 0.22
ITGB1-215ENST00000488494 IMPDH1P20839 514 aa16.43■□□□□ 0.22
ITGB1-215ENST00000488494 COL8A1P27658 744 aa16.43■□□□□ 0.22
ITGB1-215ENST00000488494 ASPHQ12797 758 aa16.43■□□□□ 0.22
ITGB1-215ENST00000488494 LCP2Q13094 533 aa16.43■□□□□ 0.22
ITGB1-215ENST00000488494 ZNF267Q14586 743 aaPredicted RBP16.43■□□□□ 0.22
ITGB1-215ENST00000488494 RNF111Q6ZNA4 994 aa16.43■□□□□ 0.22
ITGB1-215ENST00000488494 RTL4Q6ZR62 310 aa16.43■□□□□ 0.22
ITGB1-215ENST00000488494 GHDCQ8N2G8 530 aa16.43■□□□□ 0.22
ITGB1-215ENST00000488494 ZFP62Q8NB50 900 aaPredicted RBP16.43■□□□□ 0.22
ITGB1-215ENST00000488494 NUBPLQ8TB37 319 aa16.43■□□□□ 0.22
ITGB1-215ENST00000488494 L3HYPDHQ96EM0 354 aa16.43■□□□□ 0.22
ITGB1-215ENST00000488494 ANKZF1Q9H8Y5 726 aa16.43■□□□□ 0.22
ITGB1-215ENST00000488494 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.43■□□□□ 0.22
ITGB1-215ENST00000488494 STK38LQ9Y2H1 464 aa16.43■□□□□ 0.22
ITGB1-215ENST00000488494 CELSR2Q9HCU4 2923 aa16.42■□□□□ 0.22
ITGB1-215ENST00000488494 PINLYPA6NC86 204 aa16.42■□□□□ 0.22
ITGB1-215ENST00000488494 KRT6AP02538 564 aa16.42■□□□□ 0.22
ITGB1-215ENST00000488494 KRT6BP04259 564 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms