RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 NEK2P51955 445 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 CCNG1P51959 295 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 HNRNPH2P55795 449 aaKnown RBP11.51□□□□□ -0.57
SREBF1-215ENST00000487401 CUL3Q13618 768 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 SLC10A1Q14973 349 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 WHAMMP3Q1A5X7 153 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 GXYLT1Q4G148 440 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 SLC22A10Q63ZE4 541 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 ACAD11Q709F0 780 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 SLC29A4Q7RTT9 530 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 ST13P4Q8IZP2 240 aaPredicted RBP11.51□□□□□ -0.57
SREBF1-215ENST00000487401 FAM109AQ8N4B1 249 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 SLC15A4Q8N697 577 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 TMEM251Q8N6I4 163 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 PTGR2Q8N8N7 351 aaPredicted RBP11.51□□□□□ -0.57
SREBF1-215ENST00000487401 L3MBTL4Q8NA19 623 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 DOK4Q8TEW6 326 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 CHTF18Q8WVB6 975 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 IFT81Q8WYA0 676 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 RIT1Q92963 219 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 PHF21BQ96EK2 531 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 FBXL20Q96IG2 436 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 LURAP1Q96LR2 239 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 GPR78Q96P69 363 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 SERPINI1Q99574 410 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 ACSS3Q9H6R3 686 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 LDAHQ9H6V9 325 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 NOL11Q9H8H0 719 aaKnown RBP11.51□□□□□ -0.57
SREBF1-215ENST00000487401 DDX31Q9H8H2 851 aaKnown RBP11.51□□□□□ -0.57
SREBF1-215ENST00000487401 TMCO1Q9UM00 188 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 ASB4Q9Y574 426 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 HRH3Q9Y5N1 445 aa11.51□□□□□ -0.57
SREBF1-215ENST00000487401 SCN3AQ9NY46 2000 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 A0A0A6YYD5 115 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 ATP6AP2A0A1C7CYW4 349 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 A0A1W2PR48 441 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 WASHC1A8K0Z3 465 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 HRKO00198 91 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 BCKDKO14874 412 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 TMPRSS11DO60235 418 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 ZNF354AO60765 605 aaPredicted RBP11.5□□□□□ -0.57
SREBF1-215ENST00000487401 PRKRAO75569 313 aaKnown RBP11.5□□□□□ -0.57
SREBF1-215ENST00000487401 ATP6AP2O75787 350 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 ACSL3O95573 720 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 IGKV3-11P04433 115 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 CCL3P10147 92 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 NR2F6P10588 404 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 CHRNB4P30926 498 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 BSGP35613 385 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 PIGAP37287 484 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 MAGEA5P43359 124 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 DNASE1L1P49184 302 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 SERPINB9P50453 376 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 HERVK_113P63132 956 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 ERVK-8P63133 956 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 PMPCAQ10713 525 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 TBL3Q12788 808 aaKnown RBP11.5□□□□□ -0.57
SREBF1-215ENST00000487401 IFT88Q13099 833 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 ZNF791Q3KP31 576 aaPredicted RBP11.5□□□□□ -0.57
SREBF1-215ENST00000487401 TTC19Q6DKK2 380 aaPredicted RBP11.5□□□□□ -0.57
SREBF1-215ENST00000487401 MRM1Q6IN84 353 aaKnown RBP11.5□□□□□ -0.57
SREBF1-215ENST00000487401 ZNF585AQ6P3V2 769 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 MEX3BQ6ZN04 569 aaKnown RBP11.5□□□□□ -0.57
SREBF1-215ENST00000487401 RNF111Q6ZNA4 994 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 DGAT2L6Q6ZPD8 337 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 TRILQ7L0X0 811 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 NUDT13Q86X67 352 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 C9orf40Q8IXQ3 194 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 DND1Q8IYX4 353 aaKnown RBP11.5□□□□□ -0.57
SREBF1-215ENST00000487401 ZNF295-AS1Q8N0V1 137 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 MARVELD2Q8N4S9 558 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 OR5M9Q8NGP3 310 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 OR5M3Q8NGP4 307 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 LILRB4Q8NHJ6 448 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 SLC44A1Q8WWI5 657 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 ZNF592Q92610 1267 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 GAL3ST4Q96RP7 486 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 SMC6Q96SB8 1091 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 ERVK-6Q9BXR3 956 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 TRIM8Q9BZR9 551 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 EXO5Q9H790 373 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 AHSPQ9NZD4 102 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 ACAD8Q9UKU7 415 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 ERVK-19Q9WJR5 959 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.5□□□□□ -0.57
SREBF1-215ENST00000487401 CSMD1Q96PZ7 3565 aa11.5□□□□□ -0.57
SREBF1-215ENST00000487401 OR14I1A6ND48 311 aa11.49□□□□□ -0.57
SREBF1-215ENST00000487401 OR6C76A6NM76 312 aa11.49□□□□□ -0.57
SREBF1-215ENST00000487401 OR7A17O14581 309 aa11.49□□□□□ -0.57
SREBF1-215ENST00000487401 KRT38O76015 456 aa11.49□□□□□ -0.57
SREBF1-215ENST00000487401 IGHG3P01860 377 aa11.49□□□□□ -0.57
SREBF1-215ENST00000487401 GBAP04062 536 aa11.49□□□□□ -0.57
SREBF1-215ENST00000487401 SLC35E2P0CK97 266 aa11.49□□□□□ -0.57
SREBF1-215ENST00000487401 ACVR2AP27037 513 aa11.49□□□□□ -0.57
SREBF1-215ENST00000487401 SERPINB3P29508 390 aa11.49□□□□□ -0.57
SREBF1-215ENST00000487401 MAN2A2P49641 1150 aa11.49□□□□□ -0.57
SREBF1-215ENST00000487401 NR0B1P51843 470 aaKnown RBP11.49□□□□□ -0.57
SREBF1-215ENST00000487401 KCNJ2P63252 427 aa11.49□□□□□ -0.57
SREBF1-215ENST00000487401 FOXO1Q12778 655 aa11.49□□□□□ -0.57
SREBF1-215ENST00000487401 SPRED3Q2MJR0 410 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms