RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 GPS1Q13098 491 aa10.64□□□□□ -0.71
TRIM56-204ENST00000487252 TFDP2Q14188 446 aa10.64□□□□□ -0.71
TRIM56-204ENST00000487252 HERC3Q15034 1050 aa10.64□□□□□ -0.71
TRIM56-204ENST00000487252 RASA2Q15283 850 aa10.64□□□□□ -0.71
TRIM56-204ENST00000487252 FAM120AOSQ5T036 256 aa10.64□□□□□ -0.71
TRIM56-204ENST00000487252 EEF1A1P5Q5VTE0 462 aa10.64□□□□□ -0.71
TRIM56-204ENST00000487252 PLXDC2Q6UX71 529 aa10.64□□□□□ -0.71
TRIM56-204ENST00000487252 ADCK2Q7Z695 626 aa10.64□□□□□ -0.71
TRIM56-204ENST00000487252 PRUNE1Q86TP1 453 aa10.64□□□□□ -0.71
TRIM56-204ENST00000487252 EXOC3L1Q86VI1 746 aa10.64□□□□□ -0.71
TRIM56-204ENST00000487252 KLHDC8BQ8IXV7 354 aa10.64□□□□□ -0.71
TRIM56-204ENST00000487252 LRRC56Q8IYG6 542 aaPredicted RBP10.64□□□□□ -0.71
TRIM56-204ENST00000487252 OR10H5Q8NGA6 315 aa10.64□□□□□ -0.71
TRIM56-204ENST00000487252 UHMK1Q8TAS1 419 aaKnown RBP10.64□□□□□ -0.71
TRIM56-204ENST00000487252 ZNF696Q9H7X3 374 aa10.64□□□□□ -0.71
TRIM56-204ENST00000487252 PPCSQ9HAB8 311 aa10.64□□□□□ -0.71
TRIM56-204ENST00000487252 TMEM184CQ9NVA4 438 aa10.64□□□□□ -0.71
TRIM56-204ENST00000487252 ZFATQ9P243 1243 aa10.64□□□□□ -0.71
TRIM56-204ENST00000487252 BOKQ9UMX3 212 aaPredicted RBP10.64□□□□□ -0.71
TRIM56-204ENST00000487252 CAMK2AQ9UQM7 478 aa10.64□□□□□ -0.71
TRIM56-204ENST00000487252 AAR2Q9Y312 384 aaKnown RBP10.64□□□□□ -0.71
TRIM56-204ENST00000487252 ACTL7BQ9Y614 415 aa10.64□□□□□ -0.71
TRIM56-204ENST00000487252 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.63□□□□□ -0.71
TRIM56-204ENST00000487252 CCDC162PA2VCL2 907 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 FRG2CA6NGY1 282 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 E7ENX8 843 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 E7ESA3 106 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 ACSL3O95573 720 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 C1QAP02745 245 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 DANCRP0C864 163 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 ZSCAN5DPP0CG00 497 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 ETS1P14921 441 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 CHN1P15882 459 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 ITGA2P17301 1181 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 DRD4P21917 467 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 RPL22P35268 128 aaKnown RBP10.63□□□□□ -0.71
TRIM56-204ENST00000487252 CPOXP36551 454 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 HSD17B2P37059 387 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 VPS41P49754 854 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 DYNLT1P63172 113 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 TMED2Q15363 201 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 ZNF791Q3KP31 576 aaPredicted RBP10.63□□□□□ -0.71
TRIM56-204ENST00000487252 ANKRD20A4Q4UJ75 823 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 ANKRD20A2Q5SQ80 823 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 DCST1Q5T197 706 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 ANKRD20A1Q5TYW2 823 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 ANKRD20A3Q5VUR7 823 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 CYB5R2Q6BCY4 276 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 OPN5Q6U736 354 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 IL17RELQ6ZVW7 336 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 TDRPQ86YL5 185 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 PPIL6Q8IXY8 311 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 RIBC1Q8N443 379 aaPredicted RBP10.63□□□□□ -0.71
TRIM56-204ENST00000487252 ZNF740Q8NDX6 193 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 PAQR8Q8TEZ7 354 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 ZFAND2BQ8WV99 257 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 ZNF317Q96PQ6 595 aaPredicted RBP10.63□□□□□ -0.71
TRIM56-204ENST00000487252 TM9SF2Q99805 663 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 IKBKGQ9Y6K9 419 aa10.63□□□□□ -0.71
TRIM56-204ENST00000487252 A0A087WUV0 522 aaPredicted RBP10.62□□□□□ -0.71
TRIM56-204ENST00000487252 ELOA3DA6NLF2 546 aaPredicted RBP10.62□□□□□ -0.71
TRIM56-204ENST00000487252 E7EVH7 732 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 UBFD1O14562 309 aaKnown RBP10.62□□□□□ -0.71
TRIM56-204ENST00000487252 NDUFS7O75251 213 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 HPNP05981 417 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 SOD3P08294 240 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 IGHV4-31P0DP07 118 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 HRH2P25021 359 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 STIP1P31948 543 aaKnown RBP10.62□□□□□ -0.71
TRIM56-204ENST00000487252 PNLIPRP1P54315 467 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 OLR1P78380 273 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 TBL3Q12788 808 aaKnown RBP10.62□□□□□ -0.71
TRIM56-204ENST00000487252 GAB1Q13480 694 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 GBX1Q14549 363 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 ELOA3BQ3SY89 546 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 BEX5Q5H9J7 111 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 SLC22A10Q63ZE4 541 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 ADAM5Q6NVV9 412 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 ZNF474Q6S9Z5 364 aaPredicted RBP10.62□□□□□ -0.71
TRIM56-204ENST00000487252 C6orf89Q6UWU4 347 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 ZNF550Q7Z398 422 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 ASPGQ86U10 573 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 RFX6Q8HWS3 928 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 SCUBE1Q8IWY4 988 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 C3orf56Q8N813 242 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 NAT8LQ8N9F0 302 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 ELOA3Q8NG57 546 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 OR8K3Q8NH51 312 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 ZNF480Q8WV37 535 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 SLC13A3Q8WWT9 602 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 INTS12Q96CB8 462 aaKnown RBP10.62□□□□□ -0.71
TRIM56-204ENST00000487252 FOPNLQ96NB1 174 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 QKIQ96PU8 341 aaKnown RBP eCLIP10.62□□□□□ -0.71
TRIM56-204ENST00000487252 TBL1YQ9BQ87 522 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 UGT2B28Q9BY64 529 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 UBQLN3Q9H347 655 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 CLK4Q9HAZ1 481 aaKnown RBP10.62□□□□□ -0.71
TRIM56-204ENST00000487252 SAYSD1Q9NPB0 183 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 FETUBQ9UGM5 382 aa10.62□□□□□ -0.71
TRIM56-204ENST00000487252 SLC35F4A4IF30 521 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms