RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CPNE5Q9HCH3 593 aa24.77■■□□□ 1.56
HLA-C-208ENST00000487245 CLN6Q9NWW5 311 aa24.77■■□□□ 1.56
HLA-C-208ENST00000487245 PAIP2BQ9ULR5 123 aaKnown RBP24.77■■□□□ 1.56
HLA-C-208ENST00000487245 IFT52Q9Y366 437 aa24.77■■□□□ 1.56
HLA-C-208ENST00000487245 TRPM6Q9BX84 2022 aa24.77■■□□□ 1.56
HLA-C-208ENST00000487245 OR1F1O43749 312 aa24.77■■□□□ 1.56
HLA-C-208ENST00000487245 PDE9AO76083 593 aa24.77■■□□□ 1.56
HLA-C-208ENST00000487245 OXSR1O95747 527 aaPredicted RBP24.77■■□□□ 1.56
HLA-C-208ENST00000487245 GASTP01350 101 aa24.77■■□□□ 1.56
HLA-C-208ENST00000487245 CHMP24386 653 aa24.77■■□□□ 1.56
HLA-C-208ENST00000487245 PCBP4P57723 403 aaKnown RBP24.77■■□□□ 1.56
HLA-C-208ENST00000487245 ZNF45Q02386 682 aa24.77■■□□□ 1.56
HLA-C-208ENST00000487245 PUM1Q14671 1186 aaKnown RBP eCLIP24.77■■□□□ 1.56
HLA-C-208ENST00000487245 CYP27C1Q4G0S4 372 aa24.77■■□□□ 1.56
HLA-C-208ENST00000487245 CEACAM20Q6UY09 585 aa24.77■■□□□ 1.56
HLA-C-208ENST00000487245 TP53I13Q8NBR0 393 aaPredicted RBP24.77■■□□□ 1.56
HLA-C-208ENST00000487245 GTPBP3Q969Y2 492 aaKnown RBP24.77■■□□□ 1.56
HLA-C-208ENST00000487245 ZBED6CLQ96FA7 236 aaPredicted RBP24.77■■□□□ 1.56
HLA-C-208ENST00000487245 C12orf66Q96MD2 445 aa24.77■■□□□ 1.56
HLA-C-208ENST00000487245 FZD3Q9NPG1 666 aa24.77■■□□□ 1.56
HLA-C-208ENST00000487245 ACSS1Q9NUB1 689 aaPredicted RBP24.77■■□□□ 1.56
HLA-C-208ENST00000487245 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.77■■□□□ 1.56
HLA-C-208ENST00000487245 FEZF1A0PJY2 475 aa24.76■■□□□ 1.55
HLA-C-208ENST00000487245 ANTXRLA6NF34 631 aa24.76■■□□□ 1.55
HLA-C-208ENST00000487245 TMEM221A6NGB7 291 aa24.76■■□□□ 1.55
HLA-C-208ENST00000487245 RTCAO00442 366 aaKnown RBP24.76■■□□□ 1.55
HLA-C-208ENST00000487245 EN2P19622 333 aaPredicted RBP24.76■■□□□ 1.55
HLA-C-208ENST00000487245 WASP42768 502 aa24.76■■□□□ 1.55
HLA-C-208ENST00000487245 SNRPGP62308 76 aaKnown RBP24.76■■□□□ 1.55
HLA-C-208ENST00000487245 CSNK1G2P78368 415 aa24.76■■□□□ 1.55
HLA-C-208ENST00000487245 PRDX1Q06830 199 aaKnown RBP24.76■■□□□ 1.55
HLA-C-208ENST00000487245 MLC1Q15049 377 aa24.76■■□□□ 1.55
HLA-C-208ENST00000487245 DUSP7Q16829 419 aa24.76■■□□□ 1.55
HLA-C-208ENST00000487245 TRIM73Q86UV7 250 aa24.76■■□□□ 1.55
HLA-C-208ENST00000487245 SLC22A16Q86VW1 577 aa24.76■■□□□ 1.55
HLA-C-208ENST00000487245 HORMAD2Q8N7B1 307 aa24.76■■□□□ 1.55
HLA-C-208ENST00000487245 FAM46DQ8NEK8 389 aa24.76■■□□□ 1.55
HLA-C-208ENST00000487245 CAMK1GQ96NX5 476 aa24.76■■□□□ 1.55
HLA-C-208ENST00000487245 INSM2Q96T92 566 aaPredicted RBP24.76■■□□□ 1.55
HLA-C-208ENST00000487245 DDX31Q9H8H2 851 aaKnown RBP24.76■■□□□ 1.55
HLA-C-208ENST00000487245 SCHIP1Q9P0W5 487 aaPredicted RBP24.76■■□□□ 1.55
HLA-C-208ENST00000487245 OR1A2Q9Y585 309 aa24.76■■□□□ 1.55
HLA-C-208ENST00000487245 AQP9O43315 295 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 PSMB5P28074 263 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 RPS21P63220 83 aaKnown RBP24.75■■□□□ 1.55
HLA-C-208ENST00000487245 KHDRBS1Q07666 443 aaKnown RBP eCLIP24.75■■□□□ 1.55
HLA-C-208ENST00000487245 SGCGQ13326 291 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 GANABQ14697 944 aaKnown RBP24.75■■□□□ 1.55
HLA-C-208ENST00000487245 TIMM50Q3ZCQ8 353 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 ZNF776Q68DI1 518 aaPredicted RBP24.75■■□□□ 1.55
HLA-C-208ENST00000487245 LYSMD2Q8IV50 215 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 TAGAPQ8N103 731 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 SLC38A5Q8WUX1 472 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 PLA2G2FQ9BZM2 168 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 SLC25A19Q9HC21 320 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 TAS2R7Q9NYW3 318 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 MGAT4BQ9UQ53 548 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 A0A1W2PP55 124 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 FFAR1O14842 300 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 MFN2O95140 757 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 ACP5P13686 325 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 DRD2P14416 443 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 RAB28P51157 221 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 ITPRIPL2Q3MIP1 535 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 TMEM35AQ53FP2 167 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 TMEM201Q5SNT2 666 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 PTCHD4Q6ZW05 846 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 LINC01555Q8NAE3 123 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 OR2L8Q8NGY9 312 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 CHFRQ96EP1 664 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 C1QTNF2Q9BXJ5 285 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 OR51E2Q9H255 320 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 SLAMF7Q9NQ25 335 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 LHX9Q9NQ69 397 aa24.75■■□□□ 1.55
HLA-C-208ENST00000487245 ZFR2Q9UPR6 939 aaKnown RBP24.75■■□□□ 1.55
HLA-C-208ENST00000487245 ATP6V1G1O75348 118 aa24.74■■□□□ 1.55
HLA-C-208ENST00000487245 PAK4O96013 591 aaPredicted RBP24.74■■□□□ 1.55
HLA-C-208ENST00000487245 DBTP11182 482 aaKnown RBP24.74■■□□□ 1.55
HLA-C-208ENST00000487245 OSMP13725 252 aa24.74■■□□□ 1.55
HLA-C-208ENST00000487245 ETV6P41212 452 aa24.74■■□□□ 1.55
HLA-C-208ENST00000487245 UGT2B15P54855 530 aa24.74■■□□□ 1.55
HLA-C-208ENST00000487245 LIM2P55344 173 aa24.74■■□□□ 1.55
HLA-C-208ENST00000487245 ILKQ13418 452 aa24.74■■□□□ 1.55
HLA-C-208ENST00000487245 DNASE1L3Q13609 305 aa24.74■■□□□ 1.55
HLA-C-208ENST00000487245 SPDYE7PQ495Y7 208 aa24.74■■□□□ 1.55
HLA-C-208ENST00000487245 TPRG1LQ5T0D9 272 aa24.74■■□□□ 1.55
HLA-C-208ENST00000487245 PLAG1Q6DJT9 500 aa24.74■■□□□ 1.55
HLA-C-208ENST00000487245 OR4C11Q6IEV9 310 aa24.74■■□□□ 1.55
HLA-C-208ENST00000487245 C6orf120Q7Z4R8 191 aa24.74■■□□□ 1.55
HLA-C-208ENST00000487245 ZNF513Q8N8E2 541 aaPredicted RBP24.74■■□□□ 1.55
HLA-C-208ENST00000487245 RACGAP1Q9H0H5 632 aa24.74■■□□□ 1.55
HLA-C-208ENST00000487245 ZSCAN32Q9NX65 697 aa24.74■■□□□ 1.55
HLA-C-208ENST00000487245 REV1Q9UBZ9 1251 aa24.74■■□□□ 1.55
HLA-C-208ENST00000487245 TMCC3Q9ULS5 477 aa24.74■■□□□ 1.55
HLA-C-208ENST00000487245 WDR37Q9Y2I8 494 aa24.74■■□□□ 1.55
HLA-C-208ENST00000487245 PEX16Q9Y5Y5 336 aa24.74■■□□□ 1.55
HLA-C-208ENST00000487245 ZW10O43264 779 aa24.73■■□□□ 1.55
HLA-C-208ENST00000487245 SH3BP5O60239 455 aa24.73■■□□□ 1.55
HLA-C-208ENST00000487245 POU2F1P14859 743 aa24.73■■□□□ 1.55
HLA-C-208ENST00000487245 FUT4P22083 530 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms