RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 TLR9Q9NR96 1032 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 SLC6A13Q9NSD5 602 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 TXNL4BQ9NX01 149 aaKnown RBP7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 OSER1Q9NX31 292 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 SPG21Q9NZD8 308 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 MED11Q9P086 117 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 CLEC2DQ9UHP7 191 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 BTNL2Q9UIR0 455 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 GJD2Q9UKL4 321 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 AP1M2Q9Y6Q5 423 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 COL5A3P25940 1745 aaPredicted RBP7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 ABCA3Q99758 1704 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 FAM170BA6NMN3 283 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 CELF2O95319 508 aaKnown RBP7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 S100A9P06702 114 aaKnown RBP7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 BPIP17213 487 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 NUP62P37198 522 aaPredicted RBP7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 SSR2P43308 183 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 RPS26P62854 115 aaKnown RBP7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 SLC3A1Q07837 685 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 SP140Q13342 867 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 GPR50Q13585 617 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 TOMM20Q15388 145 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 XKR4Q5GH76 650 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 FAM209AQ5JX71 171 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 C9orf64Q5T6V5 341 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 FAHD1Q6P587 224 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 TPRG1Q6ZUI0 275 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 STX12Q86Y82 276 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 CFAP206Q8IYR0 622 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 GJD3Q8N144 294 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 FTMTQ8N4E7 242 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 NATD1Q8N6N6 113 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 TNFAIP8L1Q8WVP5 186 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 FATE1Q969F0 183 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 MAP6Q96JE9 813 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 SECISBP2Q96T21 854 aaKnown RBP7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 GABARAPL3Q9BY60 117 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 GALNT9Q9HCQ5 603 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 B3GNT2Q9NY97 397 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 P2RX2Q9UBL9 471 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 PPT2Q9UMR5 302 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 PRSS21Q9Y6M0 314 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 SCN9AQ15858 1988 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 DOCK5Q9H7D0 1870 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 HYKKA2RU49 373 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 CPSF4LA6NMK7 179 aaKnown RBP7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 FZD9O00144 591 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 SCO2O43819 266 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 PRKYO43930 277 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 REM1O75628 298 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 GASTP01350 101 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 MAGEA2P43356 314 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 MAGEA11P43364 429 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 MAPK9P45984 424 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 BDKRB1P46663 353 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 GPLD1P80108 840 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 FAM110CQ1W6H9 321 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 CHST9Q7L1S5 443 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 OR52P1PQ8NH57 321 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 HUS1BQ8NHY5 278 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 ST6GAL2Q96JF0 529 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 SLC12A9Q9BXP2 914 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 BHLHE41Q9C0J9 482 aaPredicted RBP7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 NT5DC2Q9H857 520 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 FBXL12Q9NXK8 326 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 ASIC5Q9NY37 505 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 MLXQ9UH92 298 aa7.32□□□□□ -1.24
COL6A4P1-202ENST00000487147 AKR7A2O43488 359 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 CSO75390 466 aaKnown RBP7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 F8A1P23610 371 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 HLA-DMAP28067 261 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 ETV6P41212 452 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 CSRP3P50461 194 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 PSMD4P55036 377 aaKnown RBP7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 MLLT1Q03111 559 aaPredicted RBP7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 HSD17B12Q53GQ0 312 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 ZNF311Q5JNZ3 666 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 COQ8AQ8NI60 647 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 ANGPTL6Q8NI99 470 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 GANCQ8TET4 914 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 ACOT12Q8WYK0 555 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 PMM1Q92871 262 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 ZIC5Q96T25 663 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 CDCA4Q9BXL8 241 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 OSGEPL1Q9H4B0 414 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 BRD7Q9NPI1 651 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 TRIM36Q9NQ86 728 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 SIRT5Q9NXA8 310 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 GPR52Q9Y2T5 361 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 M0QZQ0 153 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 HOXA2O43364 376 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 GJB5O95377 273 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 TSPAN12O95859 305 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 IGLV3-25P01717 112 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 HMGN1P05114 100 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 RB1P06400 928 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 H2AFB2P0C5Z0 115 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 UBL4AP11441 157 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 UQCRC2P22695 453 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms