RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 FAM111AQ96PZ2 611 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 PSME2Q9UL46 239 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 PPIEQ9UNP9 301 aaKnown RBP11.65□□□□□ -0.54
PTCD1-205ENST00000485746 YARS2Q9Y2Z4 477 aaKnown RBP11.65□□□□□ -0.54
PTCD1-205ENST00000485746 FIS1Q9Y3D6 152 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 NUP210LQ5VU65 1888 aa11.65□□□□□ -0.54
PTCD1-205ENST00000485746 C1orf226A1L170 272 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 A8MVJ9 347 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 ERLIN1O75477 346 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 ERAL1O75616 437 aaKnown RBP11.64□□□□□ -0.55
PTCD1-205ENST00000485746 SLC25A12O75746 678 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 OR2J2O76002 312 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 AGFG2O95081 481 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 CBX6O95503 412 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 SP1P08047 785 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 SLC35E2P0CK97 266 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 EDN3P14138 238 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 CHN1P15882 459 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 NT5EP21589 574 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 HTR6P50406 440 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 XKP51811 444 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 TRA2BP62995 288 aaKnown RBP11.64□□□□□ -0.55
PTCD1-205ENST00000485746 IGLV3-21P80748 117 aaPredicted RBP11.64□□□□□ -0.55
PTCD1-205ENST00000485746 HMGCS1Q01581 520 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 GALNT1Q10472 559 aaPredicted RBP11.64□□□□□ -0.55
PTCD1-205ENST00000485746 UBAP2LQ14157 1087 aaKnown RBP11.64□□□□□ -0.55
PTCD1-205ENST00000485746 SPIN4Q56A73 249 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 FRMD7Q6ZUT3 714 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 SLC29A4Q7RTT9 530 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 GALNTL5Q7Z4T8 443 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 CYP4Z2PQ8N1L4 340 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 FAM26EQ8N5C1 309 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 ZNF321PQ8N8H1 164 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 ST6GALNAC3Q8NDV1 305 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 CDC26Q8NHZ8 85 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 CHTF18Q8WVB6 975 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 UCN3Q969E3 161 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 HES7Q9BYE0 225 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 HPF1Q9NWY4 346 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 TEX10Q9NXF1 929 aaPredicted RBP11.64□□□□□ -0.55
PTCD1-205ENST00000485746 ZNF223Q9UK11 482 aaPredicted RBP11.64□□□□□ -0.55
PTCD1-205ENST00000485746 RAB21Q9UL25 225 aa11.64□□□□□ -0.55
PTCD1-205ENST00000485746 GOLGA6L10A6NI86 522 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 UBFD1O14562 309 aaKnown RBP11.63□□□□□ -0.55
PTCD1-205ENST00000485746 CTIFO43310 598 aaKnown RBP11.63□□□□□ -0.55
PTCD1-205ENST00000485746 PCDH7O60245 1069 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 PRKNO60260 465 aaPredicted RBP11.63□□□□□ -0.55
PTCD1-205ENST00000485746 DDAH2O95865 285 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 CHEK2O96017 543 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 MYZAPP0CAP1 466 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 UROSP10746 265 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 PORP16435 677 aaPredicted RBP11.63□□□□□ -0.55
PTCD1-205ENST00000485746 SERPINB3P29508 390 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 ALDH3A1P30838 453 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 TRHRP34981 398 aaPredicted RBP11.63□□□□□ -0.55
PTCD1-205ENST00000485746 GPR143P51810 404 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 ERVK-8P63133 956 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 RNF4P78317 190 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 PMP22Q01453 160 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 ALDH6A1Q02252 535 aaKnown RBP11.63□□□□□ -0.55
PTCD1-205ENST00000485746 TBL3Q12788 808 aaKnown RBP11.63□□□□□ -0.55
PTCD1-205ENST00000485746 CEP85LQ5SZL2 805 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 ZNF468Q5VIY5 522 aaPredicted RBP11.63□□□□□ -0.55
PTCD1-205ENST00000485746 HLA-DQA1Q5Y7H0 255 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 IL20RBQ6UXL0 311 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 GFRALQ6UXV0 394 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 RNF111Q6ZNA4 994 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 C16orf47Q6ZP98 133 aaPredicted RBP11.63□□□□□ -0.55
PTCD1-205ENST00000485746 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.63□□□□□ -0.55
PTCD1-205ENST00000485746 MDS2Q8NDY4 140 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 PPP1R14CQ8TAE6 165 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 TCP10LQ8TDR4 215 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 ZNF721Q8TF20 911 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 ZBTB9Q96C00 473 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 TM4SF18Q96CE8 201 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 TAAR6Q96RI8 345 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 TMEM109Q9BVC6 243 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 GATA5Q9BWX5 397 aaPredicted RBP11.63□□□□□ -0.55
PTCD1-205ENST00000485746 ACPTQ9BZG2 426 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 EML4Q9HC35 981 aaKnown RBP11.63□□□□□ -0.55
PTCD1-205ENST00000485746 TIMMDC1Q9NPL8 285 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 RRAGDQ9NQL2 400 aaPredicted RBP11.63□□□□□ -0.55
PTCD1-205ENST00000485746 MKS1Q9NXB0 559 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 SENP1Q9P0U3 644 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 SLC17A7Q9P2U7 560 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 MYOTQ9UBF9 498 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 MCM8Q9UJA3 840 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 ERVK-19Q9WJR5 959 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 KLF13Q9Y2Y9 288 aaPredicted RBP11.63□□□□□ -0.55
PTCD1-205ENST00000485746 PCDHGB6Q9Y5F9 930 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 PCDHA9Q9Y5H5 950 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 ZNF780BQ9Y6R6 833 aa11.63□□□□□ -0.55
PTCD1-205ENST00000485746 SPTA1P02549 2419 aa11.62□□□□□ -0.55
PTCD1-205ENST00000485746 KLRC4-KLRK1H3BQV0 150 aa11.62□□□□□ -0.55
PTCD1-205ENST00000485746 SLC28A1O00337 649 aa11.62□□□□□ -0.55
PTCD1-205ENST00000485746 NEURL1O76050 574 aa11.62□□□□□ -0.55
PTCD1-205ENST00000485746 NEFHP12036 1026 aa11.62□□□□□ -0.55
PTCD1-205ENST00000485746 FEN1P39748 380 aaKnown RBP11.62□□□□□ -0.55
PTCD1-205ENST00000485746 HK2P52789 917 aa11.62□□□□□ -0.55
PTCD1-205ENST00000485746 FOXA1P55317 472 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms