RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 XKP51811 444 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 PGDP52209 483 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 SOX8P57073 446 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 ERVK-8P63133 956 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 RPL38P63173 70 aaKnown RBP7.75□□□□□ -1.17
SF3A1-208ENST00000485618 BTG2P78543 158 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 OCRLQ01968 901 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 FOLH1Q04609 750 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 TBR1Q16650 682 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 BTBD16Q32M84 506 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 LINC00303Q3SY05 128 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 XKR7Q5GH72 579 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 C6orf136Q5SQH8 315 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 NXNQ6DKJ4 435 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 PAPD4Q6PIY7 484 aaKnown RBP7.75□□□□□ -1.17
SF3A1-208ENST00000485618 Q6ZSR9 355 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 TMEM151BQ8IW70 566 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 GALNT16Q8N428 558 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 SLC5A8Q8N695 610 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 OR5L2Q8NGL0 311 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 ZFP28Q8NHY6 868 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 CDC26Q8NHZ8 85 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 C16orf78Q8WTQ4 265 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 RIT1Q92963 219 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 KLHL29Q96CT2 875 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 ERP27Q96DN0 273 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 VMP1Q96GC9 406 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 BBS4Q96RK4 519 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 SORT1Q99523 831 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 SLC25A23Q9BV35 468 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 ZNF717Q9BY31 904 aaPredicted RBP7.75□□□□□ -1.17
SF3A1-208ENST00000485618 NUF2Q9BZD4 464 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 MEAF6Q9HAF1 191 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 KCNK13Q9HB14 408 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 ZNF160Q9HCG1 818 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 PNO1Q9NRX1 252 aaKnown RBP7.75□□□□□ -1.17
SF3A1-208ENST00000485618 PNPOQ9NVS9 261 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 GPR83Q9NYM4 423 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 TAS2R7Q9NYW3 318 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 C5AR2Q9P296 337 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 UTS2RQ9UKP6 389 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 TRIM33Q9UPN9 1127 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 CFL2Q9Y281 166 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 ZNF451Q9Y4E5 1061 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 SPTA1P02549 2419 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 IGKV3D-11A0A0A0MRZ8 115 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 ATP6AP2A0A1C7CYW4 349 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 SAGE2PA6NJ88 616 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 A6NL46 340 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 C17orf105B2RV13 164 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 TMEM233B4DJY2 109 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 C4orf51C9J302 202 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 DNAJB6O75190 326 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 ERAL1O75616 437 aaKnown RBP7.74□□□□□ -1.17
SF3A1-208ENST00000485618 ATP6AP2O75787 350 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 ZFAND5O76080 213 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 SEC24DO94855 1032 aaPredicted RBP7.74□□□□□ -1.17
SF3A1-208ENST00000485618 AIFM1O95831 613 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 IL3P08700 152 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 COX6A1P12074 109 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 BCKDHAP12694 445 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 CLCN2P51788 898 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 CLNS1AP54105 237 aaKnown RBP7.74□□□□□ -1.17
SF3A1-208ENST00000485618 HNRNPH2P55795 449 aaKnown RBP7.74□□□□□ -1.17
SF3A1-208ENST00000485618 POLE2P56282 527 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 PSPHP78330 225 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 SRSF11Q05519 484 aaKnown RBP7.74□□□□□ -1.17
SF3A1-208ENST00000485618 EEF1A2Q05639 463 aaKnown RBP7.74□□□□□ -1.17
SF3A1-208ENST00000485618 KCNAB2Q13303 367 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 MYBPC3Q14896 1274 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 KIAA0040Q15053 153 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 RFTN2Q52LD8 501 aaPredicted RBP7.74□□□□□ -1.17
SF3A1-208ENST00000485618 CRB2Q5IJ48 1285 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 CPTPQ5TA50 214 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 VWA5B1Q5TIE3 1220 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 ABHD17BQ5VST6 288 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 C18orf63Q68DL7 685 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 SLC48A1Q6P1K1 146 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 HSDL2Q6YN16 418 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 CLNKQ7Z7G1 428 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 HORMAD2Q8N7B1 307 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 B3GNT7Q8NFL0 401 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 CEP70Q8NHQ1 597 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 DNAJB14Q8TBM8 379 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 ACTRT2Q8TDY3 377 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 C8orf44Q96CB5 159 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 PPCDCQ96CD2 204 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 C11orf24Q96F05 449 aaPredicted RBP7.74□□□□□ -1.17
SF3A1-208ENST00000485618 ZNF354BQ96LW1 612 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 LMF1Q96S06 567 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 CSF3RQ99062 836 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 EBPLQ9BY08 206 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 TRIM55Q9BYV6 548 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 DEFB126Q9BYW3 111 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 TUBB1Q9H4B7 451 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 REEP4Q9H6H4 257 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 EPS8L2Q9H6S3 715 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 ZNF395Q9H8N7 513 aaPredicted RBP7.74□□□□□ -1.17
SF3A1-208ENST00000485618 AKTIPQ9H8T0 292 aa7.74□□□□□ -1.17
SF3A1-208ENST00000485618 TNFRSF12AQ9NP84 129 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms