RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 GPR19Q15760 415 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 RPS26P11Q5JNZ5 115 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 TMEM26Q6ZUK4 368 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 OLIG3Q7RTU3 272 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 CYP4Z1Q86W10 505 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 SMYD1Q8NB12 490 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 OR5D16Q8NGK9 328 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 PSMA8Q8TAA3 256 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZNF764Q96H86 408 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 SMIM10Q96HG1 83 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 DOHHQ9BU89 302 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 SPATA9Q9BWV2 254 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 NLNQ9BYT8 704 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 AMBRA1Q9C0C7 1298 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 FAM60AQ9NP50 221 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 STARD5Q9NSY2 213 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 EHD3Q9NZN3 535 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 RPS6KA6Q9UK32 745 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 PADI4Q9UM07 663 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 PCDHGA2Q9Y5H1 932 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 H0YGG7 62 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 HMGN4O00479 90 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 E2F6O75461 281 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 SEC24DO94855 1032 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 KRT75O95678 551 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 EIF2S1P05198 315 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 FABP3P05413 133 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 MYF6P23409 242 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 AVPR2P30518 371 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 YAP1P46937 504 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 CXCL12P48061 93 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 CCT3P49368 545 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 NCBP2P52298 156 aaKnown RBP eCLIP8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 ARF3P61204 181 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 STXBP1P61764 594 aaKnown RBP8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 TP53BP2Q13625 1128 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 RUNX2Q13950 521 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 TEAD4Q15561 434 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 DUSP7Q16829 419 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 OR2T5Q6IEZ7 315 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 SLC48A1Q6P1K1 146 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 USP51Q70EK9 711 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 SLC44A2Q8IWA5 706 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 DHRSXQ8N5I4 330 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 METTL25Q8N6Q8 603 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 SIMC1Q8NDZ2 872 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 OR2T29Q8NH02 315 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 BAHD1Q8TBE0 780 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZFPM2Q8WW38 1151 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 CLDN23Q96B33 292 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 MAGED4Q96JG8 741 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 HSPA12BQ96MM6 686 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZNF681Q96N22 645 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 MUS81Q96NY9 551 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 CSF3RQ99062 836 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 YIPF3Q9GZM5 350 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 TOR3AQ9H497 397 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZNF696Q9H7X3 374 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 NEUROD4Q9HD90 331 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 ACSS1Q9NUB1 689 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 NDUFAF4Q9P032 175 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 KCMF1Q9P0J7 381 aa8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 TMEFF2Q9UIK5 374 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE1-204ENST00000483763 OR5K3A6NET4 321 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZNF860A6NHJ4 632 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 OR5K4A6NMS3 321 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 C2orf74A8MZ97 194 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 TLR4O00206 839 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 MITFO75030 526 aaPredicted RBP8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 SDC3O75056 442 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 TNFAIP8O95379 198 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 H6PDO95479 791 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 TFPTP0C1Z6 253 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 SLC35G6P0C7Q6 338 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 ARAFP10398 606 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 NME1P15531 152 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 ST6GAL1P15907 406 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 CAPGP40121 348 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 CSNK1EP49674 416 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 BLKP51451 505 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 DSTNP60981 165 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 MYBPC3Q14896 1274 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 MLC1Q15049 377 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 KRT80Q6KB66 452 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 SZRD1Q7Z422 152 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 JAZF1Q86VZ6 243 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 TBC1D19Q8N5T2 526 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 OR5K1Q8NHB7 308 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 NT5CQ8TCD5 201 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 C10orf90Q96M02 699 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 MBOAT4Q96T53 435 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZFYVE21Q9BQ24 234 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 WFDC6Q9BQY6 131 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 TM9SF3Q9HD45 589 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 PDP2Q9P2J9 529 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 ANKMY1Q9P2S6 941 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 RAB23Q9ULC3 237 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 SCN2AQ99250 2005 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 GPR179Q6PRD1 2367 aa8.34□□□□□ -1.07
CDC42SE1-204ENST00000483763 ASXL3Q9C0F0 2248 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms