RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 SMU1Q2TAY7 513 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 PAPD4Q6PIY7 484 aaKnown RBP16.69■□□□□ 0.26
CPNE1-224ENST00000483359 THAP4Q8WY91 577 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 CNRIP1Q96F85 164 aaPredicted RBP16.69■□□□□ 0.26
CPNE1-224ENST00000483359 RILPQ96NA2 401 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 TMEM120AQ9BXJ8 343 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 KCNK13Q9HB14 408 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 ASIC5Q9NY37 505 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 USP24Q9UPU5 2620 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 LOC102723996A0A087X1L8 192 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 OR10H2O60403 315 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 XKP51811 444 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 DUSP2Q05923 314 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 SERTAD2Q14140 314 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 CRTC2Q53ET0 693 aaPredicted RBP16.69■□□□□ 0.26
CPNE1-224ENST00000483359 DGAT2L6Q6ZPD8 337 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 NACC2Q96BF6 587 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 CATSPER2Q96P56 530 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 DGAT2Q96PD7 388 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 WDR77Q9BQA1 342 aaPredicted RBP16.69■□□□□ 0.26
CPNE1-224ENST00000483359 REEP4Q9H6H4 257 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 AIG1Q9NVV5 245 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 SH3BP4Q9P0V3 963 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 ENTPD4Q9Y227 616 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 C9JVG2 144 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 SCAMP2O15127 329 aaKnown RBP16.68■□□□□ 0.26
CPNE1-224ENST00000483359 UBDO15205 165 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 CELA2AP08217 269 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 TNNI3P19429 210 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 HPCAL1P37235 193 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 PGDP52209 483 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 IGLV3-21P80748 117 aaPredicted RBP16.68■□□□□ 0.26
CPNE1-224ENST00000483359 PLIN5Q00G26 463 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 ZNF385BQ569K4 471 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 SPATA19Q7Z5L4 167 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 PPCDCQ96CD2 204 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 RBM18Q96H35 190 aaKnown RBP16.68■□□□□ 0.26
CPNE1-224ENST00000483359 IP6K3Q96PC2 410 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 LPAR4Q99677 370 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 SIKE1Q9BRV8 207 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 PSME2Q9UL46 239 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 ZNF780BQ9Y6R6 833 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 DNAJB5O75953 348 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 CPMP14384 443 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 COX7A2P14406 83 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 STT3AP46977 705 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 DCAF10Q5QP82 559 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 NDUFAF7Q7L592 441 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 OR7A2PQ8NGA2 310 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 ZNF700Q9H0M5 742 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 ADAP2Q9NPF8 381 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 SLC35C2Q9NQQ7 365 aa16.68■□□□□ 0.26
CPNE1-224ENST00000483359 WBP11Q9Y2W2 641 aaKnown RBP16.68■□□□□ 0.26
CPNE1-224ENST00000483359 CROCCQ5TZA2 2017 aa16.67■□□□□ 0.26
CPNE1-224ENST00000483359 C17orf105B2RV13 164 aa16.67■□□□□ 0.26
CPNE1-224ENST00000483359 PCDH17O14917 1159 aa16.67■□□□□ 0.26
CPNE1-224ENST00000483359 EFNA1P20827 205 aaPredicted RBP16.67■□□□□ 0.26
CPNE1-224ENST00000483359 RPS6KA2Q15349 733 aa16.67■□□□□ 0.26
CPNE1-224ENST00000483359 COL28A1Q2UY09 1125 aa16.67■□□□□ 0.26
CPNE1-224ENST00000483359 BTBD16Q32M84 506 aa16.67■□□□□ 0.26
CPNE1-224ENST00000483359 PARP9Q8IXQ6 854 aa16.67■□□□□ 0.26
CPNE1-224ENST00000483359 ST13P4Q8IZP2 240 aaPredicted RBP16.67■□□□□ 0.26
CPNE1-224ENST00000483359 CIDECQ96AQ7 238 aaPredicted RBP16.67■□□□□ 0.26
CPNE1-224ENST00000483359 VPS50Q96JG6 964 aa16.67■□□□□ 0.26
CPNE1-224ENST00000483359 DPY30Q9C005 99 aa16.67■□□□□ 0.26
CPNE1-224ENST00000483359 ING2Q9H160 280 aa16.67■□□□□ 0.26
CPNE1-224ENST00000483359 GIMAP4Q9NUV9 329 aa16.67■□□□□ 0.26
CPNE1-224ENST00000483359 EHD3Q9NZN3 535 aa16.67■□□□□ 0.26
CPNE1-224ENST00000483359 CLCA3PQ9Y6N3 262 aa16.67■□□□□ 0.26
CPNE1-224ENST00000483359 PKD1L2Q7Z442 2459 aa16.67■□□□□ 0.26
CPNE1-224ENST00000483359 SAGE2PA6NJ88 616 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 GABRR3A8MPY1 467 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 HPP00738 406 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 IDO1P14902 403 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 PORP16435 677 aaPredicted RBP16.66■□□□□ 0.26
CPNE1-224ENST00000483359 ARFIP2P53365 341 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 CLDN8P56748 225 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 UFM1P61960 85 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 RAPSNQ13702 412 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 ELAVL1Q15717 326 aaKnown RBP16.66■□□□□ 0.26
CPNE1-224ENST00000483359 LTB4RQ15722 352 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 CCDC116Q8IYX3 515 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 LRRC25Q8N386 305 aaPredicted RBP16.66■□□□□ 0.26
CPNE1-224ENST00000483359 CLEC1AQ8NC01 280 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 ADCY4Q8NFM4 1077 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 PTPMT1Q8WUK0 201 aaPredicted RBP16.66■□□□□ 0.26
CPNE1-224ENST00000483359 TEX37Q96LM6 180 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 FER1L6-AS2Q96M78 137 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 BBS4Q96RK4 519 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 TUBB6Q9BUF5 446 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 CCDC28BQ9BUN5 200 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 CNPPD1Q9BV87 410 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 GPR45Q9Y5Y3 372 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 GMNCA6NCL1 334 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 A6NL46 340 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 SLC35E2P0CK97 266 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 CSNK2A2P19784 350 aaPredicted RBP16.66■□□□□ 0.26
CPNE1-224ENST00000483359 PRPS1L1P21108 318 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 NT5EP21589 574 aa16.66■□□□□ 0.26
CPNE1-224ENST00000483359 Q0VFX4 171 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms