RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 DNAJB9Q9UBS3 223 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 CAMK2AQ9UQM7 478 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 CCL26Q9Y258 94 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 WBP11Q9Y2W2 641 aaKnown RBP7.37□□□□□ -1.23
SNX13-208ENST00000482558 TSC22D4Q9Y3Q8 395 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 KCNE2Q9Y6J6 123 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 SLC5A10A0PJK1 596 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 NUDT19A8MXV4 375 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 GPR89AB7ZAQ6 455 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 C1QTNF3-AMACRE9PGA6 284 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 H3BNH8 94 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 FFAR3O14843 346 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 GPR42O15529 346 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 TXNL1O43396 289 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 BMP10O95393 424 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 PDYNP01213 254 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 RPN2P04844 631 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 GPR89BP0CG08 455 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 TMIGD3P0DMS9 266 aaPredicted RBP7.36□□□□□ -1.23
SNX13-208ENST00000482558 ARSAP15289 507 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 ZNF23P17027 643 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 AMD1P17707 334 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 SERPINB1P30740 379 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 CAPGP40121 348 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 GDF5P43026 501 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 RPS9P46781 194 aaKnown RBP7.36□□□□□ -1.23
SNX13-208ENST00000482558 NRIP1P48552 1158 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 RPS3AP61247 264 aaKnown RBP7.36□□□□□ -1.23
SNX13-208ENST00000482558 TMEM115Q12893 351 aaPredicted RBP7.36□□□□□ -1.23
SNX13-208ENST00000482558 MTAPQ13126 283 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 RPA4Q13156 261 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 CHIT1Q13231 466 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 SLC14A1Q13336 389 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 ELAVL3Q14576 367 aaKnown RBP7.36□□□□□ -1.23
SNX13-208ENST00000482558 ACOX1Q15067 660 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 NRF1Q16656 503 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 SLC5A9Q2M3M2 681 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 WSCD2Q2TBF2 565 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 HNRNPA1L2Q32P51 320 aaKnown RBP7.36□□□□□ -1.23
SNX13-208ENST00000482558 SLC36A3Q495N2 470 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 TMEM52BQ4KMG9 183 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 FAM69AQ5T7M9 428 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 FAM46CQ5VWP2 391 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 TTC23Q5W5X9 447 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 CAPN13Q6MZZ7 669 aaPredicted RBP7.36□□□□□ -1.23
SNX13-208ENST00000482558 HMBOX1Q6NT76 420 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 LIPIQ6XZB0 460 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 Q6ZVL8 140 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 PIWIL3Q7Z3Z3 882 aaKnown RBP7.36□□□□□ -1.23
SNX13-208ENST00000482558 HSD11B1LQ7Z5J1 315 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 AMIGO2Q86SJ2 522 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 PATL1Q86TB9 770 aaKnown RBP7.36□□□□□ -1.23
SNX13-208ENST00000482558 SERPINA11Q86U17 422 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 THOC6Q86W42 341 aaKnown RBP7.36□□□□□ -1.23
SNX13-208ENST00000482558 IFNEQ86WN2 208 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 PPP1R3BQ86XI6 285 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 EGFL6Q8IUX8 553 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 RIMKLAQ8IXN7 391 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 MICU2Q8IYU8 434 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 CBR4Q8N4T8 237 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 NATD1Q8N6N6 113 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 Q8NFD4 153 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 OR8J2Q8NGG1 315 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 OR56A3Q8NH54 315 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 ADAMTS16Q8TE57 1224 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 SETD7Q8WTS6 366 aaKnown RBP7.36□□□□□ -1.23
SNX13-208ENST00000482558 NAT14Q8WUY8 206 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 GFM2Q969S9 779 aaKnown RBP7.36□□□□□ -1.23
SNX13-208ENST00000482558 FOXRED1Q96CU9 486 aaPredicted RBP7.36□□□□□ -1.23
SNX13-208ENST00000482558 TCEAL4Q96EI5 215 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 WDR34Q96EX3 536 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 DTD2Q96FN9 168 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 AURKBQ96GD4 344 aaPredicted RBP7.36□□□□□ -1.23
SNX13-208ENST00000482558 PEX11GQ96HA9 241 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 COQ10AQ96MF6 247 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 RNF145Q96MT1 663 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 ZNF583Q96ND8 569 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 EFCAB11Q9BUY7 163 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 RIOK2Q9BVS4 552 aaKnown RBP7.36□□□□□ -1.23
SNX13-208ENST00000482558 ACPTQ9BZG2 426 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 PITHD1Q9GZP4 211 aaPredicted RBP7.36□□□□□ -1.23
SNX13-208ENST00000482558 ABCG8Q9H221 673 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 DPEP2Q9H4A9 486 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 PDE7BQ9NP56 450 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 DECR2Q9NUI1 292 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 SPATA6Q9NWH7 488 aaPredicted RBP7.36□□□□□ -1.23
SNX13-208ENST00000482558 UBAP1Q9NZ09 502 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 GDE1Q9NZC3 331 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 PTTG2Q9NZH5 202 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 DEC1Q9P2X7 70 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 MYOTQ9UBF9 498 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 HSF4Q9ULV5 492 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 SAMD4AQ9UPU9 718 aaKnown RBP7.36□□□□□ -1.23
SNX13-208ENST00000482558 PIKFYVEQ9Y2I7 2098 aa7.36□□□□□ -1.23
SNX13-208ENST00000482558 PLXNB3Q9ULL4 1909 aa7.35□□□□□ -1.23
SNX13-208ENST00000482558 PLXNA2O75051 1894 aa7.35□□□□□ -1.23
SNX13-208ENST00000482558 TRBV5-3A0A0A0MS03 114 aa7.35□□□□□ -1.23
SNX13-208ENST00000482558 A0A0U1RQS6 177 aa7.35□□□□□ -1.23
SNX13-208ENST00000482558 MBD3L4A6NDZ8 208 aaPredicted RBP7.35□□□□□ -1.23
SNX13-208ENST00000482558 MBD3L3A6NE82 208 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms