RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 VPS4AQ9UN37 437 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 NEUROG3Q9Y4Z2 214 aa16.53■□□□□ 0.24
UPF3A-206ENST00000480362 MYOCOSA0A1B0GUC4 107 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 PMS2P1A4D2B8 440 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 PLD2O14939 933 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 CDC123O75794 336 aaPredicted RBP16.52■□□□□ 0.24
UPF3A-206ENST00000480362 NQO1P15559 274 aaKnown RBP16.52■□□□□ 0.24
UPF3A-206ENST00000480362 IL10P22301 178 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 MPIP34949 423 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 RORAP35398 523 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 SLC7A2P52569 658 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 BTG2P78543 158 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 HSPB3Q12988 150 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 SLC13A2Q13183 592 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 EIF3IQ13347 325 aaKnown RBP16.52■□□□□ 0.24
UPF3A-206ENST00000480362 NKAIN1Q4KMZ8 207 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 ZNF385CQ66K41 422 aaPredicted RBP16.52■□□□□ 0.24
UPF3A-206ENST00000480362 MED25Q71SY5 747 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 COX15Q7KZN9 410 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 SLC15A3Q8IY34 581 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 LRRC25Q8N386 305 aaPredicted RBP16.52■□□□□ 0.24
UPF3A-206ENST00000480362 SUN3Q8TAQ9 357 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 UTP4Q969X6 686 aaKnown RBP16.52■□□□□ 0.24
UPF3A-206ENST00000480362 TMEM125Q96AQ2 219 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 CLPTM1LQ96KA5 538 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 PHF12Q96QT6 1004 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 OR1F2PQ96R84 312 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 TAAR9Q96RI9 348 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 TRIM8Q9BZR9 551 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 SPAG4Q9NPE6 437 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 MKKSQ9NPJ1 570 aaPredicted RBP16.52■□□□□ 0.24
UPF3A-206ENST00000480362 CMTM6Q9NX76 183 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 TMEM181Q9P2C4 612 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 ZNF282Q9UDV7 671 aaPredicted RBP16.52■□□□□ 0.24
UPF3A-206ENST00000480362 PACSIN3Q9UKS6 424 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 PRPF19Q9UMS4 504 aaKnown RBP16.52■□□□□ 0.24
UPF3A-206ENST00000480362 B3GALT1Q9Y5Z6 326 aa16.52■□□□□ 0.24
UPF3A-206ENST00000480362 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.52■□□□□ 0.24
UPF3A-206ENST00000480362 SCN2AQ99250 2005 aa16.52■□□□□ 0.23
UPF3A-206ENST00000480362 EP300Q09472 2414 aaPredicted RBP16.51■□□□□ 0.23
UPF3A-206ENST00000480362 C15orf38-AP3S2A0A0A6YYH1 394 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 A0A1W2PNU3 283 aaPredicted RBP16.51■□□□□ 0.23
UPF3A-206ENST00000480362 OR2W5A6NFC9 320 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 CFAP73A6NFT4 308 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 MEN1O00255 615 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 BMP10O95393 424 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 ONECUT2O95948 504 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 CPMP14384 443 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 PORP16435 677 aaPredicted RBP16.51■□□□□ 0.23
UPF3A-206ENST00000480362 PPP2R1BP30154 601 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 PTGER1P34995 402 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 CDK9P50750 372 aaKnown RBP16.51■□□□□ 0.23
UPF3A-206ENST00000480362 HSD17B7P56937 341 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 STX4Q12846 297 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 TARDBPQ13148 414 aaKnown RBP eCLIP16.51■□□□□ 0.238e-6■□□□□ 10.7
UPF3A-206ENST00000480362 SELPLGQ14242 412 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 VWA2Q5GFL6 755 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 RABL3Q5HYI8 236 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 ARPINQ7Z6K5 226 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 ZC3H7AQ8IWR0 971 aaKnown RBP16.51■□□□□ 0.23
UPF3A-206ENST00000480362 CACTIN-AS1Q8N1I8 211 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 CLEC4FQ8N1N0 589 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 WDR36Q8NI36 951 aaKnown RBP16.51■□□□□ 0.23
UPF3A-206ENST00000480362 AURKBQ96GD4 344 aaPredicted RBP16.51■□□□□ 0.23
UPF3A-206ENST00000480362 RAB3IPQ96QF0 476 aaPredicted RBP16.51■□□□□ 0.23
UPF3A-206ENST00000480362 ZPBPQ9BS86 351 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 THUMPD3Q9BV44 507 aaKnown RBP16.51■□□□□ 0.23
UPF3A-206ENST00000480362 ULBP3Q9BZM4 244 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 TRIM4Q9C037 500 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 MMADHCQ9H3L0 296 aaPredicted RBP16.51■□□□□ 0.23
UPF3A-206ENST00000480362 CXorf36Q9H7Y0 433 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 LANCL2Q9NS86 450 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 SIRT3Q9NTG7 399 aaPredicted RBP16.51■□□□□ 0.23
UPF3A-206ENST00000480362 L3MBTL1Q9Y468 752 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 SNX8Q9Y5X2 465 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 KIF26BQ2KJY2 2108 aa16.51■□□□□ 0.23
UPF3A-206ENST00000480362 CLIC1O00299 241 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 NME4O00746 187 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 KLK3P07288 261 aaPredicted RBP16.5■□□□□ 0.23
UPF3A-206ENST00000480362 AGXTP21549 392 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 UQCRC2P22695 453 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 GPC1P35052 558 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 SOAT1P35610 550 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 MTPNP58546 118 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 C3orf38Q5JPI3 329 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 MFSD4BQ5TF39 518 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 LCN10Q6JVE6 187 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 TMPRSS12Q86WS5 348 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 SCUBE1Q8IWY4 988 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 ARHGAP24Q8N264 748 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 TRIML2Q8N7C3 387 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 OR8J3Q8NGG0 315 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 PSMA8Q8TAA3 256 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 ZFP90Q8TF47 636 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 LRFN5Q96NI6 719 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 SH3GL1Q99961 368 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 CPPED1Q9BRF8 314 aaPredicted RBP16.5■□□□□ 0.23
UPF3A-206ENST00000480362 SLC35A5Q9BS91 424 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 DDA1Q9BW61 102 aa16.5■□□□□ 0.23
UPF3A-206ENST00000480362 ASPSCR1Q9BZE9 553 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms