RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 PPP2R1BP30154 601 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 GABRA4P48169 554 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 KHKP50053 298 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 MAPK10P53779 464 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 RAB38P57729 211 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 VSX2P58304 361 aaPredicted RBP10.39□□□□□ -0.75
VTI1A-204ENST00000480057 SELENOWP63302 87 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 BNC1Q01954 994 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 FOLH1Q04609 750 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 SQSTM1Q13501 440 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 FAM53BQ14153 422 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 GK3PQ14409 553 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 NKG7Q16617 165 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 CYBRD1Q53TN4 286 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 PRAMEF8Q5VWM4 474 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 PRAMEF7Q5VXH5 474 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 REEP3Q6NUK4 255 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 CEACAM20Q6UY09 585 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 KANSL1Q7Z3B3 1105 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 PLXDC1Q8IUK5 500 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 EPHX4Q8IUS5 362 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 ZDHHC21Q8IVQ6 265 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 MAML2Q8IZL2 1156 aaPredicted RBP10.39□□□□□ -0.75
VTI1A-204ENST00000480057 CLEC4FQ8N1N0 589 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 LRRC25Q8N386 305 aaPredicted RBP10.39□□□□□ -0.75
VTI1A-204ENST00000480057 SLC25A45Q8N413 288 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 OR5AK3PQ8NH89 298 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 CEP76Q8TAP6 659 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 SLC35G5Q96KT7 338 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 DCBLD2Q96PD2 775 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 MAP3K3Q99759 626 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 KLHL25Q9H0H3 589 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 NTN4Q9HB63 628 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 IL21RQ9HBE5 538 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 ANKHQ9HCJ1 492 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 FAM60AQ9NP50 221 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 PDE7BQ9NP56 450 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 BATF3Q9NR55 127 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 ZCCHC3Q9NUD5 404 aaKnown RBP10.39□□□□□ -0.75
VTI1A-204ENST00000480057 OAZ3Q9UMX2 235 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 PADI2Q9Y2J8 665 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 V9GYQ6 96 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 SPAG17Q6Q759 2223 aa10.39□□□□□ -0.75
VTI1A-204ENST00000480057 EYSQ5T1H1 3165 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 MN1Q10571 1320 aaPredicted RBP10.38□□□□□ -0.75
VTI1A-204ENST00000480057 IGHV1OR21-1A0A087WYE8 117 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 FAM149AA5PLN7 773 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 TMEM221A6NGB7 291 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 SAC3D1A6NKF1 404 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 M0R296 226 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 CYR61O00622 381 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 TOX3O15405 576 aaPredicted RBP10.38□□□□□ -0.75
VTI1A-204ENST00000480057 SH3BP5O60239 455 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 B4GALT2O60909 372 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 GCM2O75603 506 aaPredicted RBP10.38□□□□□ -0.75
VTI1A-204ENST00000480057 BMP10O95393 424 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 ZNF682O95780 498 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 AGR2O95994 175 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 EIF2S1P05198 315 aaKnown RBP10.38□□□□□ -0.75
VTI1A-204ENST00000480057 FABP3P05413 133 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 TFPTP0C1Z6 253 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 MSL3P1P0C860 447 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 CKMT2P17540 419 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 MLLT3P42568 568 aaPredicted RBP10.38□□□□□ -0.75
VTI1A-204ENST00000480057 MRPS35P82673 323 aaKnown RBP10.38□□□□□ -0.75
VTI1A-204ENST00000480057 CSTF1Q05048 431 aaKnown RBP10.38□□□□□ -0.75
VTI1A-204ENST00000480057 EPS8Q12929 822 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 C16orf72Q14CZ0 275 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 WDR74Q6RFH5 385 aaPredicted RBP10.38□□□□□ -0.75
VTI1A-204ENST00000480057 PRSS42Q7Z5A4 293 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 HIPK1Q86Z02 1210 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 ZDHHC13Q8IUH4 622 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 ARMC8Q8IUR7 673 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 ZC3H7AQ8IWR0 971 aaKnown RBP10.38□□□□□ -0.75
VTI1A-204ENST00000480057 SLC35F3Q8IY50 421 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 LGI4Q8N135 537 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 CA13Q8N1Q1 262 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 GALNT4Q8N4A0 578 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 CBR4Q8N4T8 237 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 HORMAD2Q8N7B1 307 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 C7orf57Q8NEG2 295 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 OR5K1Q8NHB7 308 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 NFKBIDQ8NI38 313 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 RASSF5Q8WWW0 418 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 UCN3Q969E3 161 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 MAL2Q969L2 176 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 SDCCAG3Q96C92 435 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 ELP4Q96EB1 424 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 NRBF2Q96F24 287 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 AHCYL2Q96HN2 611 aaKnown RBP10.38□□□□□ -0.75
VTI1A-204ENST00000480057 VPS50Q96JG6 964 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 HSH2DQ96JZ2 352 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 SLC29A1Q99808 456 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 THSD1Q9NS62 852 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 USE1Q9NZ43 259 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 PTGFRNQ9P2B2 879 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 IFT80Q9P2H3 777 aaPredicted RBP10.38□□□□□ -0.75
VTI1A-204ENST00000480057 P2RX2Q9UBL9 471 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 BAG5Q9UL15 447 aa10.38□□□□□ -0.75
VTI1A-204ENST00000480057 MRPS2Q9Y399 296 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms