RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 PTPMT1Q8WUK0 201 aaPredicted RBP10.12□□□□□ -0.79
ATG4B-219ENST00000479941 PSMF1Q92530 271 aa10.12□□□□□ -0.79
ATG4B-219ENST00000479941 C19orf60Q96EN9 201 aa10.12□□□□□ -0.79
ATG4B-219ENST00000479941 DGAT2Q96PD7 388 aa10.12□□□□□ -0.79
ATG4B-219ENST00000479941 EBPLQ9BY08 206 aa10.12□□□□□ -0.79
ATG4B-219ENST00000479941 ZNF71Q9NQZ8 489 aaPredicted RBP10.12□□□□□ -0.79
ATG4B-219ENST00000479941 TEKT2Q9UIF3 430 aa10.12□□□□□ -0.79
ATG4B-219ENST00000479941 CES1P1Q9UKY3 287 aa10.12□□□□□ -0.79
ATG4B-219ENST00000479941 TP53TG5Q9Y2B4 290 aa10.12□□□□□ -0.79
ATG4B-219ENST00000479941 DLGAP4Q9Y2H0 992 aa10.12□□□□□ -0.79
ATG4B-219ENST00000479941 POLR3HQ9Y535 204 aaPredicted RBP10.12□□□□□ -0.79
ATG4B-219ENST00000479941 CNTRLQ7Z7A1 2325 aa10.12□□□□□ -0.79
ATG4B-219ENST00000479941 DOCK10Q96BY6 2186 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 COL6A6A6NMZ7 2263 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 MYOCOSA0A1B0GUC4 107 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 WASHC1A8K0Z3 465 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 SLCO1B7G3V0H7 640 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 OR10H2O60403 315 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 DPM1O60762 260 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 CELA2AP08217 269 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 NR1D1P20393 614 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 SOX11P35716 441 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 ALDH9A1P49189 494 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 CLCN2P51788 898 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 GPR143P51810 404 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 XKP51811 444 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 RPL38P63173 70 aaKnown RBP10.11□□□□□ -0.79
ATG4B-219ENST00000479941 OCRLQ01968 901 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 PDCD2Q16342 344 aaPredicted RBP10.11□□□□□ -0.79
ATG4B-219ENST00000479941 SMU1Q2TAY7 513 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 GALNTL6Q49A17 601 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 ATP6AP1LQ52LC2 224 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 RFTN2Q52LD8 501 aaPredicted RBP10.11□□□□□ -0.79
ATG4B-219ENST00000479941 HSP90B2PQ58FF3 399 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 H3F3CQ6NXT2 135 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 IGFL2Q6UWQ7 119 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 IGFL3Q6UXB1 125 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 ISLR2Q6UXK2 745 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 SAMD14Q8IZD0 417 aaPredicted RBP10.11□□□□□ -0.79
ATG4B-219ENST00000479941 SIRT6Q8N6T7 355 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 APCDD1LQ8NCL9 501 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.11□□□□□ -0.79
ATG4B-219ENST00000479941 LRRC8CQ8TDW0 803 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 DYDC1Q8WWB3 177 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 ZNF75CPQ92670 426 aaPredicted RBP10.11□□□□□ -0.79
ATG4B-219ENST00000479941 UCN3Q969E3 161 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 VMP1Q96GC9 406 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 FCRL1Q96LA6 429 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 C3orf30Q96M34 536 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 LMF1Q96S06 567 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 SEMA4CQ9C0C4 833 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 EPS8L2Q9H6S3 715 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 KCNK13Q9HB14 408 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 MYNNQ9NPC7 610 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 INTS9Q9NV88 658 aaKnown RBP10.11□□□□□ -0.79
ATG4B-219ENST00000479941 EHD3Q9NZN3 535 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 PTGFRNQ9P2B2 879 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 HEY2Q9UBP5 337 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 ZNF780BQ9Y6R6 833 aa10.11□□□□□ -0.79
ATG4B-219ENST00000479941 SPENQ96T58 3664 aaKnown RBP10.11□□□□□ -0.79
ATG4B-219ENST00000479941 ATP6AP2A0A1C7CYW4 349 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 A8MUI8 341 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 K7EM74 188 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 CDK2AP1O14519 115 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 PEX11AO75192 247 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 ERAL1O75616 437 aaKnown RBP10.1□□□□□ -0.79
ATG4B-219ENST00000479941 ATP6AP2O75787 350 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 PDGFAP04085 211 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 CPMP14384 443 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 PORP16435 677 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-219ENST00000479941 CSNK2A2P19784 350 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-219ENST00000479941 DDCP20711 480 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 HK2P52789 917 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 C2orf80Q0P641 193 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 MAD2L1Q13257 205 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-219ENST00000479941 MFAP5Q13361 173 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 SPRED3Q2MJR0 410 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 C6orf136Q5SQH8 315 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 FAM71E1Q6IPT2 247 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 LRRC34Q8IZ02 419 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 LGI4Q8N135 537 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 SLC5A8Q8N695 610 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 AMER2Q8N7J2 671 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 OR1N1Q8NGS0 311 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 CDC26Q8NHZ8 85 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 RIT1Q92963 219 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 NCLNQ969V3 563 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 PPWD1Q96BP3 646 aaKnown RBP10.1□□□□□ -0.79
ATG4B-219ENST00000479941 KLHL29Q96CT2 875 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 TUBGCP3Q96CW5 907 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 ART5Q96L15 291 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 ZNF354BQ96LW1 612 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 DEFB126Q9BYW3 111 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 OR8D2Q9GZM6 311 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 MED4Q9NPJ6 270 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 PNPOQ9NVS9 261 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.1□□□□□ -0.791e-6■□□□□ 8.3
ATG4B-219ENST00000479941 TAS2R7Q9NYW3 318 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 COPS7AQ9UBW8 275 aa10.1□□□□□ -0.79
ATG4B-219ENST00000479941 RALYQ9UKM9 306 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms