RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 TSFMP43897 325 aaKnown RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 GSTM5P46439 218 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 CPA2P48052 419 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 SEPHS1P49903 392 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 POLR2JP52435 117 aaKnown RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 PDX1P52945 283 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 MAPK12P53778 367 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 RAB8AP61006 207 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 TRA2BP62995 288 aaKnown RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 TGM3Q08188 693 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 PDE7AQ13946 482 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 CYLC2Q14093 348 aaPredicted RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 KCNAB1Q14722 419 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 KIR3DS1Q14943 382 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 MLANAQ16655 118 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 UGT8Q16880 541 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 TIGD2Q4W5G0 525 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 SPANXN4Q5MJ08 99 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 MANEAQ5SRI9 462 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 CCNYL2Q5T2Q4 361 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 REP15Q6BDI9 236 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 OR4C11Q6IEV9 310 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 MRM1Q6IN84 353 aaKnown RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 FAM71E1Q6IPT2 247 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 TRIM40Q6P9F5 258 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 ABHD13Q7L211 337 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 PRSS41Q7RTY9 318 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 ARHGAP22Q7Z5H3 698 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 CAMKMTQ7Z624 323 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 PIP4P1Q86T03 277 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 AMER3Q8N944 861 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 GLB1L3Q8NCI6 653 aaPredicted RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 SRFBP1Q8NEF9 429 aaKnown RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 OR8K5Q8NH50 307 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 CDC26Q8NHZ8 85 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 RP9Q8TA86 221 aaKnown RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 ABHD4Q8TB40 342 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 C16orf78Q8WTQ4 265 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 TSPEARQ8WU66 669 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 STARD8Q92502 1023 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 TESCQ96BS2 214 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 SLC7A6OSQ96CW6 309 aaPredicted RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 RCN3Q96D15 328 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 SPDL1Q96EA4 605 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 SMIM10Q96HG1 83 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 EGLN2Q96KS0 407 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 C10orf90Q96M02 699 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 GFM1Q96RP9 751 aaKnown RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 ZBTB18Q99592 522 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 TBCDQ9BTW9 1192 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 TUBB6Q9BUF5 446 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 NLNQ9BYT8 704 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 DPY30Q9C005 99 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 ROGDIQ9GZN7 287 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 LRMDAQ9H2I8 198 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 COPS7BQ9H9Q2 264 aaPredicted RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 AP5S1Q9NUS5 200 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 SIDT1Q9NXL6 827 aaKnown RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 ATP6V1HQ9UI12 483 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 EXO1Q9UQ84 846 aaKnown RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 SPTBN4Q9H254 2564 aa6.29□□□□□ -1.4
USP48-208ENST00000479177 NUP214P35658 2090 aaPredicted RBP6.29□□□□□ -1.4
USP48-208ENST00000479177 LOC100653049A0A140TA62 436 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 ARHGAP10A1A4S6 786 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 DYTNA2CJ06 578 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 A8MU76 341 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 B8ZZF3 427 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 TMEM150CB9EJG8 249 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 FXYD1O00168 92 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 TXNDC9O14530 226 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 MRASO14807 208 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 CFLARO15519 480 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 AKAP10O43572 662 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 PSPNO60542 156 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 GALR3O60755 368 aaPredicted RBP6.28□□□□□ -1.4
USP48-208ENST00000479177 TBX19O60806 448 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 ATP5HO75947 161 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 KRT34O76011 436 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 ZNF205O95201 554 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 LRATO95237 230 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 FAM58BPP0C7Q3 252 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 FOLR1P15328 257 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 ALOX12P18054 663 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 IL1RNP18510 177 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 DNAJA1P31689 397 aaKnown RBP6.28□□□□□ -1.4
USP48-208ENST00000479177 CPOXP36551 454 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 DGKQP52824 942 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 MTTPP55157 894 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 HNRNPH2P55795 449 aaKnown RBP6.28□□□□□ -1.4
USP48-208ENST00000479177 KCNK10P57789 538 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 TAS2R50P59544 299 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 BTN3A2P78410 334 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 KLC1Q07866 573 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 SPIDRQ14159 915 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 GPR19Q15760 415 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 DPY19L1Q2PZI1 675 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 FAM174BQ3ZCQ3 159 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 VPS26BQ4G0F5 336 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 DEFB134Q4QY38 66 aa6.28□□□□□ -1.4
USP48-208ENST00000479177 ANKRD39Q53RE8 183 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms