RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 GHDCQ8N2G8 530 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 GOLM1Q8NBJ4 401 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 PSD4Q8NDX1 1056 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 ASB15Q8WXK1 588 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 MTFMTQ96DP5 389 aaKnown RBP21.71■■□□□ 1.07
C9orf3-215ENST00000478473 L3HYPDHQ96EM0 354 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 SGCZQ96LD1 299 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 PLSCR2Q9NRY7 297 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 HPF1Q9NWY4 346 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 NPIPA1Q9UND3 350 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 SNX6Q9UNH7 406 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 CROCCQ5TZA2 2017 aa21.71■■□□□ 1.07
C9orf3-215ENST00000478473 MYO7BQ6PIF6 2116 aa21.7■■□□□ 1.06
C9orf3-215ENST00000478473 WWP2O00308 870 aa21.7■■□□□ 1.06
C9orf3-215ENST00000478473 ZNF354AO60765 605 aaPredicted RBP21.7■■□□□ 1.06
C9orf3-215ENST00000478473 ZG16O60844 167 aa21.7■■□□□ 1.06
C9orf3-215ENST00000478473 PRKRAO75569 313 aaKnown RBP21.7■■□□□ 1.06
C9orf3-215ENST00000478473 OR6B1O95007 311 aa21.7■■□□□ 1.06
C9orf3-215ENST00000478473 HSD3B1P14060 373 aa21.7■■□□□ 1.06
C9orf3-215ENST00000478473 HSD3B2P26439 372 aa21.7■■□□□ 1.06
C9orf3-215ENST00000478473 ARL1P40616 181 aaPredicted RBP21.7■■□□□ 1.06
C9orf3-215ENST00000478473 SOX3P41225 446 aa21.7■■□□□ 1.06
C9orf3-215ENST00000478473 MEOX1P50221 254 aa21.7■■□□□ 1.06
C9orf3-215ENST00000478473 GALNT1Q10472 559 aaPredicted RBP21.7■■□□□ 1.06
C9orf3-215ENST00000478473 TBL3Q12788 808 aaKnown RBP21.7■■□□□ 1.06
C9orf3-215ENST00000478473 PIGGQ5H8A4 983 aa21.7■■□□□ 1.06
C9orf3-215ENST00000478473 TTC19Q6DKK2 380 aaPredicted RBP21.7■■□□□ 1.06
C9orf3-215ENST00000478473 OR52E8Q6IFG1 317 aa21.7■■□□□ 1.06
C9orf3-215ENST00000478473 SLC22A9Q8IVM8 553 aa21.7■■□□□ 1.06
C9orf3-215ENST00000478473 C9orf40Q8IXQ3 194 aa21.7■■□□□ 1.06
C9orf3-215ENST00000478473 SLC15A4Q8N697 577 aa21.7■■□□□ 1.06
C9orf3-215ENST00000478473 PPWD1Q96BP3 646 aaKnown RBP21.7■■□□□ 1.06
C9orf3-215ENST00000478473 TMEM237Q96Q45 408 aa21.7■■□□□ 1.06
C9orf3-215ENST00000478473 LIN28AQ9H9Z2 209 aaKnown RBP21.7■■□□□ 1.06
C9orf3-215ENST00000478473 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.7■■□□□ 1.06
C9orf3-215ENST00000478473 DCDC2Q9UHG0 476 aa21.7■■□□□ 1.06
C9orf3-215ENST00000478473 NBPF19A0A087WUL8 3843 aa21.69■■□□□ 1.06
C9orf3-215ENST00000478473 TRGV8A0A0C4DH27 118 aa21.69■■□□□ 1.06
C9orf3-215ENST00000478473 WASHC1A8K0Z3 465 aa21.69■■□□□ 1.06
C9orf3-215ENST00000478473 PDYNP01213 254 aa21.69■■□□□ 1.06
C9orf3-215ENST00000478473 PYGBP11216 843 aa21.69■■□□□ 1.06
C9orf3-215ENST00000478473 HIST2H2BCQ6DN03 193 aa21.69■■□□□ 1.06
C9orf3-215ENST00000478473 OPN5Q6U736 354 aa21.69■■□□□ 1.06
C9orf3-215ENST00000478473 GSPT2Q8IYD1 628 aaKnown RBP21.69■■□□□ 1.06
C9orf3-215ENST00000478473 MRPL1Q9BYD6 325 aaKnown RBP21.69■■□□□ 1.06
C9orf3-215ENST00000478473 FARSBQ9NSD9 589 aaKnown RBP21.69■■□□□ 1.06
C9orf3-215ENST00000478473 DEPPQ9NTK1 212 aa21.69■■□□□ 1.06
C9orf3-215ENST00000478473 TEX10Q9NXF1 929 aaPredicted RBP21.69■■□□□ 1.06
C9orf3-215ENST00000478473 ERVK-11Q9UQG0 969 aa21.69■■□□□ 1.06
C9orf3-215ENST00000478473 STK38LQ9Y2H1 464 aa21.69■■□□□ 1.06
C9orf3-215ENST00000478473 OR6C76A6NM76 312 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 HRKO00198 91 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 PGRMC2O15173 223 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 SUPT7LO94864 414 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 OR4F21O95013 312 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 NADKO95544 446 aaPredicted RBP21.68■■□□□ 1.06
C9orf3-215ENST00000478473 GBAP04062 536 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 KLK1P06870 262 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 SLC37A1P57057 533 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 TEX35Q5T0J7 233 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 LYPD8Q6UX82 237 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 IL20RBQ6UXL0 311 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 RTL4Q6ZR62 310 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 COMMD6Q7Z4G1 85 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 ITLN2Q8WWU7 325 aaPredicted RBP21.68■■□□□ 1.06
C9orf3-215ENST00000478473 SELENOMQ8WWX9 145 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 RIT1Q92963 219 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 UCN3Q969E3 161 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 CCDC120Q96HB5 630 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 TSPAN10Q9H1Z9 355 aaPredicted RBP21.68■■□□□ 1.06
C9orf3-215ENST00000478473 CXorf21Q9HAI6 301 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 SH2D2AQ9NP31 389 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 NMRK1Q9NWW6 199 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 CES1P1Q9UKY3 287 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 EMCNQ9ULC0 261 aa21.68■■□□□ 1.06
C9orf3-215ENST00000478473 GLOD5A6NK44 160 aa21.67■■□□□ 1.06
C9orf3-215ENST00000478473 CCL21O00585 134 aa21.67■■□□□ 1.06
C9orf3-215ENST00000478473 GUCY1B2O75343 617 aa21.67■■□□□ 1.06
C9orf3-215ENST00000478473 CLPSP04118 112 aa21.67■■□□□ 1.06
C9orf3-215ENST00000478473 TSPAN8P19075 237 aa21.67■■□□□ 1.06
C9orf3-215ENST00000478473 CASP6P55212 293 aa21.67■■□□□ 1.06
C9orf3-215ENST00000478473 NAA20P61599 178 aa21.67■■□□□ 1.06
C9orf3-215ENST00000478473 ART3Q13508 389 aa21.67■■□□□ 1.06
C9orf3-215ENST00000478473 C3AR1Q16581 482 aa21.67■■□□□ 1.06
C9orf3-215ENST00000478473 ZNF791Q3KP31 576 aaPredicted RBP21.67■■□□□ 1.06
C9orf3-215ENST00000478473 NDUFAF5Q5TEU4 345 aa21.67■■□□□ 1.06
C9orf3-215ENST00000478473 RPTNQ6XPR3 784 aa21.67■■□□□ 1.06
C9orf3-215ENST00000478473 RGS9BPQ6ZS82 235 aa21.67■■□□□ 1.06
C9orf3-215ENST00000478473 FGD2Q7Z6J4 655 aa21.67■■□□□ 1.06
C9orf3-215ENST00000478473 DND1Q8IYX4 353 aaKnown RBP21.67■■□□□ 1.06
C9orf3-215ENST00000478473 CCDC126Q96EE4 140 aa21.67■■□□□ 1.06
C9orf3-215ENST00000478473 MAGED4Q96JG8 741 aa21.67■■□□□ 1.06
C9orf3-215ENST00000478473 SUCOQ9UBS9 1254 aaKnown RBP21.67■■□□□ 1.06
C9orf3-215ENST00000478473 SLC12A4Q9UP95 1085 aa21.67■■□□□ 1.06
C9orf3-215ENST00000478473 PCDHA9Q9Y5H5 950 aa21.67■■□□□ 1.06
C9orf3-215ENST00000478473 A0A1W2PPM1 405 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 SERTM1A2A2V5 107 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 GOLGA8RI6L899 631 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 MANBAO00462 879 aa21.66■■□□□ 1.06
C9orf3-215ENST00000478473 GLRA3O75311 464 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms