RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 PEX6Q13608 980 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 PDE7AQ13946 482 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 VAMP3Q15836 100 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 SLC15A2Q16348 729 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 CDO1Q16878 200 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 ASTE1Q2TB18 679 aaPredicted RBP3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 IQCCQ4KMZ1 466 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 TMEM35AQ53FP2 167 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 CBWD5Q5RIA9 395 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 PRAMEF5Q5TYX0 476 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 PRAMEF8Q5VWM4 474 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 PRAMEF6Q5VXH4 476 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 TIGD3Q6B0B8 471 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 SPOPLQ6IQ16 392 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 ANKRD26P1Q6NSI1 321 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 LRRC8BQ6P9F7 803 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 SLC27A1Q6PCB7 646 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 BRAT1Q6PJG6 821 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 TMEM220Q6QAJ8 160 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 PCSK4Q6UW60 755 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 CWC27Q6UX04 472 aaKnown RBP3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 TMEM108Q6UXF1 575 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 CD300LGQ6UXG3 332 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 SLC16A12Q6ZSM3 486 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 PID1Q7Z2X4 250 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 SLC46A3Q7Z3Q1 461 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 TECPR1Q7Z6L1 1165 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 GPR180Q86V85 440 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 SLC26A11Q86WA9 606 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 PHF13Q86YI8 300 aaPredicted RBP3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 TMC8Q8IU68 726 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 RBM45Q8IUH3 476 aaKnown RBP3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 ZNF786Q8N393 782 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 METTL25Q8N6Q8 603 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 PQLC3Q8N755 202 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 DNAJC5GQ8N7S2 189 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 B3GALNT2Q8NCR0 500 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 TMEM185AQ8NFB2 350 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 RDM1Q8NG50 284 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 DTX3LQ8TDB6 740 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 PTPMT1Q8WUK0 201 aaPredicted RBP3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 PIGBQ92521 554 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 EMG1Q92979 244 aaKnown RBP3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 SLCO4A1Q96BD0 722 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 C3orf49Q96BT1 292 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 SAT2Q96F10 170 aaPredicted RBP3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 LRRC46Q96FV0 321 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 SMIM10Q96HG1 83 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 DNAJC1Q96KC8 554 aaKnown RBP3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 SENP8Q96LD8 212 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 SLITRK1Q96PX8 696 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 PANX1Q96RD7 426 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 TGS1Q96RS0 853 aaKnown RBP3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 CITED1Q99966 193 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 OMDQ99983 421 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 MAPKAP1Q9BPZ7 522 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 APOL2Q9BQE5 337 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 SH2D3AQ9BRG2 576 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 C17orf80Q9BSJ5 609 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 ALG12Q9BV10 488 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 TPSD1Q9BZJ3 242 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 OR2B2Q9GZK3 357 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 GAL3ST2Q9H3Q3 398 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 GOLPH3Q9H4A6 298 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 CAB39LQ9H9S4 337 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 RNF146Q9NTX7 359 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 TXLNGQ9NUQ3 528 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 OLAHQ9NV23 265 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 TMLHEQ9NVH6 421 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 TMEM248Q9NWD8 314 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 PAG1Q9NWQ8 432 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 GID8Q9NWU2 228 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 NLGN3Q9NZ94 848 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 DLGAP2Q9P1A6 1054 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 TXNDC16Q9P2K2 825 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 ONECUT1Q9UBC0 465 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 XPR1Q9UBH6 696 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 FBXL17Q9UF56 701 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 WARS2Q9UGM6 360 aaKnown RBP3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 DAPK2Q9UIK4 370 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 SIX4Q9UIU6 781 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 SCML1Q9UN30 329 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 KCNK6Q9Y257 313 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 GDAQ9Y2T3 454 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 UBE2J1Q9Y385 318 aaPredicted RBP3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 DHRS7Q9Y394 339 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 ZNF337Q9Y3M9 751 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 ZHX2Q9Y6X8 837 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 PDS5AQ29RF7 1337 aaKnown RBP3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 EP400Q96L91 3159 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 CCDC144AA2RUR9 1427 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 RRBP1Q9P2E9 1410 aaKnown RBP3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 LAMC1P11047 1609 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 KNDC1Q76NI1 1749 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 ABCA3Q99758 1704 aa3.33□□□□□ -1.88
FNDC3B-209ENST00000478016 SRCAPQ6ZRS2 3230 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 C13orf42A0A1B0GVH6 325 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 TMEM213A2RRL7 107 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 CLEC18AA5D8T8 446 aa3.32□□□□□ -1.88
FNDC3B-209ENST00000478016 NPIPB13A6NJU9 1138 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms