RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 ANKRD26P1Q6NSI1 321 aa18.67■□□□□ 0.58
ACTB-210ENST00000477812 FAM180BQ6P0A1 224 aa18.67■□□□□ 0.58
ACTB-210ENST00000477812 LRRC69Q6ZNQ3 347 aa18.67■□□□□ 0.58
ACTB-210ENST00000477812 CPEB2Q7Z5Q1 589 aaKnown RBP18.67■□□□□ 0.58
ACTB-210ENST00000477812 CAMKMTQ7Z624 323 aa18.67■□□□□ 0.58
ACTB-210ENST00000477812 FAM9CQ8IZT9 166 aa18.67■□□□□ 0.58
ACTB-210ENST00000477812 OR4K14Q8NGD5 310 aa18.67■□□□□ 0.58
ACTB-210ENST00000477812 CATSPER2Q96P56 530 aa18.67■□□□□ 0.58
ACTB-210ENST00000477812 ZNF700Q9H0M5 742 aa18.67■□□□□ 0.58
ACTB-210ENST00000477812 EPN3Q9H201 632 aa18.67■□□□□ 0.58
ACTB-210ENST00000477812 SLAMF7Q9NQ25 335 aa18.67■□□□□ 0.58
ACTB-210ENST00000477812 MIEF1Q9NQG6 463 aa18.67■□□□□ 0.58
ACTB-210ENST00000477812 SLC35C2Q9NQQ7 365 aa18.67■□□□□ 0.58
ACTB-210ENST00000477812 P4HTMQ9NXG6 502 aa18.67■□□□□ 0.58
ACTB-210ENST00000477812 IGHV1-45A0A0A0MS14 117 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 IGHV3-20A0A0C4DH32 117 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 MYOCOSA0A1B0GUC4 107 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 CDC14CA4D256 554 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 SYNDIG1LA6NDD5 238 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 K7ENP7 123 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 SNX3O60493 162 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 SLC35E2P0CK97 266 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 PRKAR1AP10644 381 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 CPMP14384 443 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 PIK3R1P27986 724 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 IL12AP29459 219 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 UFM1P61960 85 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 EEF1A2Q05639 463 aaKnown RBP18.66■□□□□ 0.58
ACTB-210ENST00000477812 SFT2D3Q587I9 215 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 BROXQ5VW32 411 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 METTL21CQ5VZV1 264 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 INO80CQ6PI98 192 aaPredicted RBP18.66■□□□□ 0.58
ACTB-210ENST00000477812 CCDC81Q6ZN84 652 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 DGAT2L6Q6ZPD8 337 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 SPATA21Q7Z572 469 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 ST13P4Q8IZP2 240 aaPredicted RBP18.66■□□□□ 0.58
ACTB-210ENST00000477812 OR7A2PQ8NGA2 310 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 SUN3Q8TAQ9 357 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 SNRNP27Q8WVK2 155 aaKnown RBP18.66■□□□□ 0.58
ACTB-210ENST00000477812 EXOSC8Q96B26 276 aaKnown RBP18.66■□□□□ 0.58
ACTB-210ENST00000477812 PPCDCQ96CD2 204 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 COQ8BQ96D53 544 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 ELAC2Q9BQ52 826 aaKnown RBP18.66■□□□□ 0.58
ACTB-210ENST00000477812 FAM107BQ9H098 131 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 NSRP1Q9H0G5 558 aaKnown RBP18.66■□□□□ 0.58
ACTB-210ENST00000477812 CLMPQ9H6B4 373 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 CPNE5Q9HCH3 593 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 ADAP2Q9NPF8 381 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 C19orf25Q9UFG5 118 aaPredicted RBP18.66■□□□□ 0.58
ACTB-210ENST00000477812 FBXL4Q9UKA2 621 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 PSME2Q9UL46 239 aa18.66■□□□□ 0.58
ACTB-210ENST00000477812 MYO1GB0I1T2 1018 aa18.65■□□□□ 0.58
ACTB-210ENST00000477812 CSNK2A2P19784 350 aaPredicted RBP18.65■□□□□ 0.58
ACTB-210ENST00000477812 GPX3P22352 226 aa18.65■□□□□ 0.58
ACTB-210ENST00000477812 RPL3P39023 403 aaKnown RBP18.65■□□□□ 0.58
ACTB-210ENST00000477812 FRKP42685 505 aaPredicted RBP18.65■□□□□ 0.58
ACTB-210ENST00000477812 ZFP36L2P47974 494 aaKnown RBP18.65■□□□□ 0.58
ACTB-210ENST00000477812 ATP4BP51164 291 aa18.65■□□□□ 0.58
ACTB-210ENST00000477812 XKP51811 444 aa18.65■□□□□ 0.58
ACTB-210ENST00000477812 UCNP55089 124 aa18.65■□□□□ 0.58
ACTB-210ENST00000477812 OR4D2P58180 307 aa18.65■□□□□ 0.58
ACTB-210ENST00000477812 BIKQ13323 160 aa18.65■□□□□ 0.58
ACTB-210ENST00000477812 TERF2Q15554 542 aa18.65■□□□□ 0.58
ACTB-210ENST00000477812 ELAVL1Q15717 326 aaKnown RBP18.65■□□□□ 0.58
ACTB-210ENST00000477812 R3HCC1LQ7Z5L2 792 aaKnown RBP18.65■□□□□ 0.58
ACTB-210ENST00000477812 THAP4Q8WY91 577 aa18.65■□□□□ 0.58
ACTB-210ENST00000477812 TESCQ96BS2 214 aa18.65■□□□□ 0.58
ACTB-210ENST00000477812 IMMP1LQ96LU5 166 aa18.65■□□□□ 0.58
ACTB-210ENST00000477812 IP6K3Q96PC2 410 aa18.65■□□□□ 0.58
ACTB-210ENST00000477812 DPY30Q9C005 99 aa18.65■□□□□ 0.58
ACTB-210ENST00000477812 ZIM2Q9NZV7 527 aa18.65■□□□□ 0.58
ACTB-210ENST00000477812 ZMIZ1Q9ULJ6 1067 aa18.65■□□□□ 0.58
ACTB-210ENST00000477812 G3BP2Q9UN86 482 aaKnown RBP18.65■□□□□ 0.58
ACTB-210ENST00000477812 COPG1Q9Y678 874 aaKnown RBP18.65■□□□□ 0.58
ACTB-210ENST00000477812 ERAL1O75616 437 aaKnown RBP18.64■□□□□ 0.57
ACTB-210ENST00000477812 SEC24DO94855 1032 aaPredicted RBP18.64■□□□□ 0.57
ACTB-210ENST00000477812 ATP1B1P05026 303 aa18.64■□□□□ 0.57
ACTB-210ENST00000477812 LAMP1P11279 417 aa18.64■□□□□ 0.57
ACTB-210ENST00000477812 COX7A2P14406 83 aa18.64■□□□□ 0.57
ACTB-210ENST00000477812 GALNSP34059 522 aa18.64■□□□□ 0.57
ACTB-210ENST00000477812 SOX18P35713 384 aa18.64■□□□□ 0.57
ACTB-210ENST00000477812 FEN1P39748 380 aaKnown RBP18.64■□□□□ 0.57
ACTB-210ENST00000477812 NME5P56597 212 aa18.64■□□□□ 0.57
ACTB-210ENST00000477812 TMPRSS3P57727 454 aa18.64■□□□□ 0.57
ACTB-210ENST00000477812 IRX1P78414 480 aaPredicted RBP18.64■□□□□ 0.57
ACTB-210ENST00000477812 PLIN5Q00G26 463 aa18.64■□□□□ 0.57
ACTB-210ENST00000477812 PAPD4Q6PIY7 484 aaKnown RBP18.64■□□□□ 0.57
ACTB-210ENST00000477812 PIGWQ7Z7B1 504 aa18.64■□□□□ 0.57
ACTB-210ENST00000477812 CPLX4Q7Z7G2 160 aa18.64■□□□□ 0.57
ACTB-210ENST00000477812 SAMD14Q8IZD0 417 aaPredicted RBP18.64■□□□□ 0.57
ACTB-210ENST00000477812 MIER2Q8N344 545 aa18.64■□□□□ 0.57
ACTB-210ENST00000477812 AMER2Q8N7J2 671 aa18.64■□□□□ 0.57
ACTB-210ENST00000477812 C7orf57Q8NEG2 295 aa18.64■□□□□ 0.57
ACTB-210ENST00000477812 NFAM1Q8NET5 270 aaPredicted RBP18.64■□□□□ 0.57
ACTB-210ENST00000477812 PTPMT1Q8WUK0 201 aaPredicted RBP18.64■□□□□ 0.57
ACTB-210ENST00000477812 CIDECQ96AQ7 238 aaPredicted RBP18.64■□□□□ 0.57
ACTB-210ENST00000477812 RILPQ96NA2 401 aa18.64■□□□□ 0.57
ACTB-210ENST00000477812 CNTNAP3BQ96NU0 1288 aa18.64■□□□□ 0.57
ACTB-210ENST00000477812 PELOQ9BRX2 385 aaKnown RBP18.64■□□□□ 0.57
ACTB-210ENST00000477812 CNTNAP3Q9BZ76 1288 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms