RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 CXorf36Q9H7Y0 433 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 CAAP1Q9H8G2 361 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 EVA1AQ9H8M9 152 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 TBC1D17Q9HA65 648 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 SIRT3Q9NTG7 399 aaPredicted RBP7.51□□□□□ -1.21
VMA21-203ENST00000477649 GPATCH2Q9NW75 528 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 UBAP1Q9NZ09 502 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 NTMQ9P121 344 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 RAPGEFL1Q9UHV5 662 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 CES1P1Q9UKY3 287 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 BLOC1S6Q9UL45 172 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 PNMA8BQ9ULN7 279 aaPredicted RBP7.51□□□□□ -1.21
VMA21-203ENST00000477649 FAM32AQ9Y421 112 aaKnown RBP7.51□□□□□ -1.21
VMA21-203ENST00000477649 MAP4K5Q9Y4K4 846 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 SNX8Q9Y5X2 465 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 V9GYQ6 96 aa7.51□□□□□ -1.21
VMA21-203ENST00000477649 A0A087WXM4 84 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 PRAMEF33A0A0G2JMD5 474 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 A0A0G2JPF8 293 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 DPPA5A6NC42 116 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 TRIM64A6NGJ6 449 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 HNRNPCL2B2RXH8 293 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 HNRNPCL3B7ZW38 293 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 H3BNH8 94 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 M0QX08 132 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 PLOD2O00469 737 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 DLGAP1O14490 977 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 SLC16A6O15403 523 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 JRKO75564 520 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 DNAJB5O75953 348 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 PGM3O95394 542 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 AIFM1O95831 613 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 TFPTP0C1Z6 253 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 PABPC4LP0CB38 370 aaKnown RBP7.5□□□□□ -1.21
VMA21-203ENST00000477649 HNRNPCL4P0DMR1 293 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 ITGAMP11215 1152 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 ANXA8P13928 327 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 ETS2P15036 469 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 IL9P15248 144 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 RHCEP18577 417 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 CPN2P22792 545 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 TTKP33981 857 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 SOX11P35716 441 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 NCBP2P52298 156 aaKnown RBP eCLIP7.5□□□□□ -1.21
VMA21-203ENST00000477649 HMGA2P52926 109 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 CRISP3P54108 245 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 C21orf59P57076 290 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 NXPH1P58417 271 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 CSNK2BP67870 215 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 KCNJ10P78508 379 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 RPL6Q02878 288 aaKnown RBP7.5□□□□□ -1.21
VMA21-203ENST00000477649 HSPB3Q12988 150 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 KEAP1Q14145 624 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 TCEA2Q15560 299 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 NKG7Q16617 165 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 RBM48Q5RL73 367 aaKnown RBP7.5□□□□□ -1.21
VMA21-203ENST00000477649 OTUD3Q5T2D3 398 aaPredicted RBP7.5□□□□□ -1.21
VMA21-203ENST00000477649 GARNL3Q5VVW2 1013 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 FCRL6Q6DN72 434 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 TMEM214Q6NUQ4 689 aaKnown RBP7.5□□□□□ -1.21
VMA21-203ENST00000477649 ZCCHC12Q6PEW1 402 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 TTC33Q6PID6 262 aaPredicted RBP7.5□□□□□ -1.21
VMA21-203ENST00000477649 USP53Q70EK8 1073 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 CYP4Z1Q86W10 505 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 C8orf59Q8N0T1 100 aaPredicted RBP7.5□□□□□ -1.21
VMA21-203ENST00000477649 LGI4Q8N135 537 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 LINC00471Q8N535 108 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 CSNK1A1LQ8N752 337 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 FAM86B1Q8N7N1 296 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 OR4K14Q8NGD5 310 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 NFKBIDQ8NI38 313 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 BBS10Q8TAM1 723 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 CYGBQ8WWM9 190 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 PROX1Q92786 737 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 TANKQ92844 425 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 C7orf34Q96L11 122 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 SLC38A3Q99624 504 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 CCDC3Q9BQI4 270 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 PSD2Q9BQI7 771 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 AICDAQ9GZX7 198 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 RUBCNLQ9H714 662 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 CACYBPQ9HB71 228 aaKnown RBP7.5□□□□□ -1.21
VMA21-203ENST00000477649 SLAMF7Q9NQ25 335 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 ENAMQ9NRM1 1142 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 ZCCHC3Q9NUD5 404 aaKnown RBP7.5□□□□□ -1.21
VMA21-203ENST00000477649 TEX10Q9NXF1 929 aaPredicted RBP7.5□□□□□ -1.21
VMA21-203ENST00000477649 PTGFRNQ9P2B2 879 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 DAPP1Q9UN19 280 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 SIT1Q9Y3P8 196 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 SAMHD1Q9Y3Z3 626 aaKnown RBP7.5□□□□□ -1.21
VMA21-203ENST00000477649 ATG4BQ9Y4P1 393 aa7.5□□□□□ -1.21
VMA21-203ENST00000477649 TRBV23OR9-2A0A075B6M9 112 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 A0A087WV62 115 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 A0A0J9YVX5 310 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 SYNDIG1LA6NDD5 238 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 H0YGG7 62 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 SCAMP1O15126 338 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 CASC3O15234 703 aaKnown RBP7.49□□□□□ -1.21
VMA21-203ENST00000477649 AQP9O43315 295 aa7.49□□□□□ -1.21
VMA21-203ENST00000477649 GDF9O60383 454 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms