RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 GXYLT1Q4G148 440 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 SLC9B1Q4ZJI4 515 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 LCN1P1Q5VSP4 162 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 BICRALQ6AI39 1079 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 LRRC8EQ6NSJ5 796 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 ACSM5Q6NUN0 579 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 LPCAT3Q6P1A2 487 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 NPNTQ6UXI9 565 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 C3P1Q6ZMU1 363 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 ZCCHC23Q6ZST2 131 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 SLC24A5Q71RS6 500 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 PIGZQ86VD9 579 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 IQCHQ86VS3 1027 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 PHF13Q86YI8 300 aaPredicted RBP3.96□□□□□ -1.78
CD55-208ENST00000476590 FAM71AQ8IYT1 594 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 SVBPQ8N300 66 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 C1orf52Q8N6N3 182 aaKnown RBP3.96□□□□□ -1.78
CD55-208ENST00000476590 NAT16Q8N8M0 369 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 SLC44A5Q8NCS7 719 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 DUSP18Q8NEJ0 188 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 FAM46DQ8NEK8 389 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 NUDT10Q8NFP7 164 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 OLIG1Q8TAK6 271 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 BBS10Q8TAM1 723 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 ZDHHC1Q8WTX9 485 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 TRAPPC12Q8WVT3 735 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 LARP4BQ92615 738 aaKnown RBP3.96□□□□□ -1.78
CD55-208ENST00000476590 PIGKQ92643 395 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 THRSPQ92748 146 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 KAT2AQ92830 837 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 SLC5A5Q92911 643 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 COQ8BQ96D53 544 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 TPD52L3Q96J77 140 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 PRMT6Q96LA8 375 aaPredicted RBP3.96□□□□□ -1.78
CD55-208ENST00000476590 IFT27Q9BW83 186 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 RNF26Q9BY78 433 aaPredicted RBP3.96□□□□□ -1.78
CD55-208ENST00000476590 SMOC2Q9H3U7 446 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 FN3KQ9H479 309 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 PRDM13Q9H4Q3 707 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 ZNF385DQ9H6B1 395 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 RNF122Q9H9V4 155 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 PDE7BQ9NP56 450 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 CCNB1IP1Q9NPC3 277 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 PDGFCQ9NRA1 345 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.96□□□□□ -1.78
CD55-208ENST00000476590 PNPOQ9NVS9 261 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.96□□□□□ -1.78
CD55-208ENST00000476590 MOKQ9UQ07 419 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 AURKCQ9UQB9 309 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 POFUT2Q9Y2G5 429 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 TPRKBQ9Y3C4 175 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 OTOFQ9HC10 1997 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 KIF1BO60333 1816 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 PRG4Q92954 1404 aaPredicted RBP3.96□□□□□ -1.78
CD55-208ENST00000476590 A0A1B0GVI7 797 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 SERTM2A0A1B0GWG4 89 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 GSAPA4D1B5 854 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 LCHNA4D1U4 455 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 CXorf65A6NEN9 183 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 LRRC14BA6NHZ5 514 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 TMEM238C9JI98 176 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 PTGES3LE9PB15 166 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 MKRN2OSH3BPM6 223 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 SURF4O15260 269 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 CACNG3O60359 315 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 SUPT7LO94864 414 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 LDLRP01130 860 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 CSF2P04141 144 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 CYBBP04839 570 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 RPLP0P05388 317 aaKnown RBP3.96□□□□□ -1.78
CD55-208ENST00000476590 ANXA5P08758 320 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 FGF3P11487 239 aaPredicted RBP3.96□□□□□ -1.78
CD55-208ENST00000476590 PAX1P15863 534 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 HIST1H1BP16401 226 aaKnown RBP3.96□□□□□ -1.78
CD55-208ENST00000476590 NPR2P20594 1047 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 LTKP29376 864 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 CALCRP30988 508 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 SFNP31947 248 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 IGFALSP35858 605 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 FEN1P39748 380 aaKnown RBP3.96□□□□□ -1.78
CD55-208ENST00000476590 CTSKP43235 329 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 MAGEA2P43356 314 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 MAP2K4P45985 399 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 GABRB2P47870 512 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 HSPA7P48741 367 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 RAB5CP51148 216 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 CCR5P51681 352 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 SLC12A3P55017 1021 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 TAS2R40P59535 323 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 BTG1P62324 171 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 GPC5P78333 572 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 DCDP81605 110 aaKnown RBP3.96□□□□□ -1.78
CD55-208ENST00000476590 YWHAHQ04917 246 aaPredicted RBP3.96□□□□□ -1.78
CD55-208ENST00000476590 PPP3CAQ08209 521 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 CD47Q08722 323 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 ACSM1Q08AH1 577 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 SKP2Q13309 424 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 DAG1Q14118 895 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 DGCR6Q14129 220 aa3.96□□□□□ -1.78
CD55-208ENST00000476590 LASP1Q14847 261 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms