RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 SSR4P51571 173 aa19.64■□□□□ 0.73
LIME1-204ENST00000476183 LCP2Q13094 533 aa19.64■□□□□ 0.73
LIME1-204ENST00000476183 BIKQ13323 160 aa19.64■□□□□ 0.73
LIME1-204ENST00000476183 CCNYL2Q5T2Q4 361 aa19.64■□□□□ 0.73
LIME1-204ENST00000476183 GFRALQ6UXV0 394 aa19.64■□□□□ 0.73
LIME1-204ENST00000476183 MDGA2Q7Z553 956 aa19.64■□□□□ 0.73
LIME1-204ENST00000476183 ST13P4Q8IZP2 240 aaPredicted RBP19.64■□□□□ 0.73
LIME1-204ENST00000476183 CYP4Z2PQ8N1L4 340 aa19.64■□□□□ 0.73
LIME1-204ENST00000476183 C7orf57Q8NEG2 295 aa19.64■□□□□ 0.73
LIME1-204ENST00000476183 OR8K3Q8NH51 312 aa19.64■□□□□ 0.73
LIME1-204ENST00000476183 RASL10BQ96S79 203 aa19.64■□□□□ 0.73
LIME1-204ENST00000476183 WDR41Q9HAD4 459 aa19.64■□□□□ 0.73
LIME1-204ENST00000476183 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.64■□□□□ 0.73
LIME1-204ENST00000476183 V9GYY5 206 aaPredicted RBP19.64■□□□□ 0.73
LIME1-204ENST00000476183 UBFD1O14562 309 aaKnown RBP19.63■□□□□ 0.73
LIME1-204ENST00000476183 OR6B1O95007 311 aa19.63■□□□□ 0.73
LIME1-204ENST00000476183 UNC5CO95185 931 aa19.63■□□□□ 0.73
LIME1-204ENST00000476183 SLU7O95391 586 aaKnown RBP19.63■□□□□ 0.73
LIME1-204ENST00000476183 MLYCDO95822 493 aa19.63■□□□□ 0.73
LIME1-204ENST00000476183 STSP08842 583 aa19.63■□□□□ 0.73
LIME1-204ENST00000476183 MYL2P10916 166 aa19.63■□□□□ 0.73
LIME1-204ENST00000476183 SLC18A2Q05940 514 aa19.63■□□□□ 0.73
LIME1-204ENST00000476183 RNFT1Q5M7Z0 435 aa19.63■□□□□ 0.73
LIME1-204ENST00000476183 NDUFAF5Q5TEU4 345 aa19.63■□□□□ 0.73
LIME1-204ENST00000476183 OR52E8Q6IFG1 317 aa19.63■□□□□ 0.73
LIME1-204ENST00000476183 PAGE2Q7Z2X7 111 aa19.63■□□□□ 0.73
LIME1-204ENST00000476183 SIAH3Q8IW03 269 aa19.63■□□□□ 0.73
LIME1-204ENST00000476183 C9orf40Q8IXQ3 194 aa19.63■□□□□ 0.73
LIME1-204ENST00000476183 C4orf33Q8N1A6 199 aa19.63■□□□□ 0.73
LIME1-204ENST00000476183 CPSF7Q8N684 471 aaKnown RBP19.63■□□□□ 0.73
LIME1-204ENST00000476183 CCNYL1Q8N7R7 359 aa19.63■□□□□ 0.73
LIME1-204ENST00000476183 METTL6Q8TCB7 284 aa19.63■□□□□ 0.73
LIME1-204ENST00000476183 AENQ8WTP8 325 aaKnown RBP19.63■□□□□ 0.73
LIME1-204ENST00000476183 TMEM125Q96AQ2 219 aa19.63■□□□□ 0.73
LIME1-204ENST00000476183 KCNA7Q96RP8 456 aa19.63■□□□□ 0.73
LIME1-204ENST00000476183 TSPAN10Q9H1Z9 355 aaPredicted RBP19.63■□□□□ 0.73
LIME1-204ENST00000476183 COPS7AQ9UBW8 275 aa19.63■□□□□ 0.73
LIME1-204ENST00000476183 SEC14L3Q9UDX4 400 aa19.63■□□□□ 0.73
LIME1-204ENST00000476183 LRRTM2O43300 516 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 KRT6AP02538 564 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 KRT6BP04259 564 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 NUDT17P0C025 328 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 KRT4P19013 534 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 SOX3P41225 446 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 CCT5P48643 541 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 KRT6CP48668 564 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 MAPK12P53778 367 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 PKNOX1P55347 436 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 ERVK-8P63133 956 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 ALDH6A1Q02252 535 aaKnown RBP19.62■□□□□ 0.73
LIME1-204ENST00000476183 CCDC153Q494R4 210 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 C4orf17Q53FE4 359 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 MYO7BQ6PIF6 2116 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 SULF2Q8IWU5 870 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 MMP21Q8N119 569 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 C1orf52Q8N6N3 182 aaKnown RBP19.62■□□□□ 0.73
LIME1-204ENST00000476183 AGAP11Q8TF27 550 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 ASB15Q8WXK1 588 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 FBXL20Q96IG2 436 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 CNPPD1Q9BV87 410 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 ACPTQ9BZG2 426 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 VPS29Q9UBQ0 182 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 GRID1Q9ULK0 1009 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 ERVK-19Q9WJR5 959 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 TIMM22Q9Y584 194 aa19.62■□□□□ 0.73
LIME1-204ENST00000476183 TLDC2A0PJX2 215 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 A8MVJ9 347 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 COPEO14579 308 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 OR10H2O60403 315 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 ULK1O75385 1050 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 ESRRBO95718 433 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 CLPSP04118 112 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 ENO1P06733 434 aaKnown RBP19.61■□□□□ 0.73
LIME1-204ENST00000476183 SLC35E2P0CK97 266 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 HSD3B1P14060 373 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 HSD3B2P26439 372 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 HMOX2P30519 316 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 FOXA1P55317 472 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 ZNF267Q14586 743 aaPredicted RBP19.61■□□□□ 0.73
LIME1-204ENST00000476183 SPRED3Q2MJR0 410 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 ZNF750Q32MQ0 723 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 C1QL3Q5VWW1 255 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 WDR93Q6P2C0 686 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 IL20RBQ6UXL0 311 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 FAM98AQ8NCA5 519 aaKnown RBP19.61■□□□□ 0.73
LIME1-204ENST00000476183 OR5L2Q8NGL0 311 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 CHTF18Q8WVB6 975 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 RIT1Q92963 219 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 TM4SF18Q96CE8 201 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 CCDC126Q96EE4 140 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 GPR137Q96N19 417 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 PELOQ9BRX2 385 aaKnown RBP19.61■□□□□ 0.73
LIME1-204ENST00000476183 HPF1Q9NWY4 346 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 CES1P1Q9UKY3 287 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 STK38LQ9Y2H1 464 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 KLF13Q9Y2Y9 288 aaPredicted RBP19.61■□□□□ 0.73
LIME1-204ENST00000476183 PCDHA9Q9Y5H5 950 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 EML6Q6ZMW3 1958 aa19.61■□□□□ 0.73
LIME1-204ENST00000476183 NPIPA5E9PKD4 350 aa19.6■□□□□ 0.73
LIME1-204ENST00000476183 GP1BBP13224 206 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms