RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 PWWP2BQ6NUJ5 590 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 ZFP1Q6P2D0 407 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 R3HCC1LQ7Z5L2 792 aaKnown RBP17.04■□□□□ 0.32
ATG4B-217ENST00000475693 CAMKMTQ7Z624 323 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 MARCH9Q86YJ5 346 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 TTC29Q8NA56 475 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-217ENST00000475693 CATSPER1Q8NEC5 780 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 DEFB124Q8NES8 71 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 TMEM125Q96AQ2 219 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 YIPF2Q9BWQ6 316 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 GID8Q9NWU2 228 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 SERTAD3Q9UJW9 196 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 FAM186AA6NE01 2351 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 KNTC1P50748 2209 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 FER1L5A0AVI2 2057 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 A0A1W2PRB8 838 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 FITM1A5D6W6 292 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 CYR61O00622 381 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 NR2F6P10588 404 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 COQ5Q5HYK3 327 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 LPCAT4Q643R3 524 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 DHRS13Q6UX07 377 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 KMT5CQ86Y97 462 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 GPR135Q8IZ08 494 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 ALDH16A1Q8IZ83 802 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 CARFQ8N187 725 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 ADCY4Q8NFM4 1077 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 MAGED4Q96JG8 741 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 BHLHE41Q9C0J9 482 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-217ENST00000475693 RPF2Q9H7B2 306 aaKnown RBP17.04■□□□□ 0.32
ATG4B-217ENST00000475693 TMEM181Q9P2C4 612 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 SNX8Q9Y5X2 465 aa17.04■□□□□ 0.32
ATG4B-217ENST00000475693 TOX3O15405 576 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-217ENST00000475693 DNAJA2O60884 412 aa17.03■□□□□ 0.32
ATG4B-217ENST00000475693 B4GALT2O60909 372 aa17.03■□□□□ 0.32
ATG4B-217ENST00000475693 ANKRD34CP0C6C1 535 aa17.03■□□□□ 0.32
ATG4B-217ENST00000475693 HOXB9P17482 250 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-217ENST00000475693 ITIH1P19827 911 aa17.03■□□□□ 0.32
ATG4B-217ENST00000475693 TRA2BP62995 288 aaKnown RBP17.03■□□□□ 0.32
ATG4B-217ENST00000475693 MS4A2Q01362 244 aa17.03■□□□□ 0.32
ATG4B-217ENST00000475693 TNFRSF17Q02223 184 aa17.03■□□□□ 0.32
ATG4B-217ENST00000475693 DPY19L1Q2PZI1 675 aa17.03■□□□□ 0.32
ATG4B-217ENST00000475693 PIGGQ5H8A4 983 aa17.03■□□□□ 0.32
ATG4B-217ENST00000475693 SLC48A1Q6P1K1 146 aa17.03■□□□□ 0.32
ATG4B-217ENST00000475693 PQLC1Q8N2U9 271 aa17.03■□□□□ 0.32
ATG4B-217ENST00000475693 AMER2Q8N7J2 671 aa17.03■□□□□ 0.32
ATG4B-217ENST00000475693 SIMC1Q8NDZ2 872 aa17.03■□□□□ 0.32
ATG4B-217ENST00000475693 HIPK4Q8NE63 616 aa17.03■□□□□ 0.32
ATG4B-217ENST00000475693 COL26A1Q96A83 441 aa17.03■□□□□ 0.32
ATG4B-217ENST00000475693 FAIM2Q9BWQ8 316 aa17.03■□□□□ 0.32
ATG4B-217ENST00000475693 GLIPR2Q9H4G4 154 aa17.03■□□□□ 0.32
ATG4B-217ENST00000475693 RMND5AQ9H871 391 aa17.03■□□□□ 0.32
ATG4B-217ENST00000475693 SPAG4Q9NPE6 437 aa17.03■□□□□ 0.32
ATG4B-217ENST00000475693 SLC35C2Q9NQQ7 365 aa17.03■□□□□ 0.32
ATG4B-217ENST00000475693 FAM120CQ9NX05 1096 aaKnown RBP17.03■□□□□ 0.32
ATG4B-217ENST00000475693 LYARQ9NX58 379 aaKnown RBP17.03■□□□□ 0.32
ATG4B-217ENST00000475693 RAB26Q9ULW5 256 aa17.03■□□□□ 0.32
ATG4B-217ENST00000475693 TRBV5-3A0A0A0MS03 114 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 C1orf226A1L170 272 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 DYTNA2CJ06 578 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 TXNDC9O14530 226 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 GP1BAP07359 652 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 CDK9P50750 372 aaKnown RBP17.02■□□□□ 0.32
ATG4B-217ENST00000475693 ARFIP1P53367 373 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 MANFP55145 182 aaKnown RBP17.02■□□□□ 0.32
ATG4B-217ENST00000475693 PCBP4P57723 403 aaKnown RBP17.02■□□□□ 0.32
ATG4B-217ENST00000475693 BTG2P78543 158 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 INSM1Q01101 510 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-217ENST00000475693 LTB4RQ15722 352 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 HACD2Q6Y1H2 254 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 SLCO6A1Q86UG4 719 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 PRSS58Q8IYP2 241 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 DPYSL5Q9BPU6 564 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 THUMPD3Q9BV44 507 aaKnown RBP17.02■□□□□ 0.32
ATG4B-217ENST00000475693 CXorf36Q9H7Y0 433 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 AKIRIN1Q9H9L7 192 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-217ENST00000475693 ATAD3AQ9NVI7 634 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 SIDT1Q9NXL6 827 aaKnown RBP17.02■□□□□ 0.32
ATG4B-217ENST00000475693 MAN2B2Q9Y2E5 1009 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 DTNAQ9Y4J8 743 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 RNASET2O00584 256 aaKnown RBP17.02■□□□□ 0.32
ATG4B-217ENST00000475693 PDPK1O15530 556 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 FGF17O60258 216 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 DRD2P14416 443 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 CSTF2P33240 577 aaKnown RBP eCLIP17.02■□□□□ 0.32
ATG4B-217ENST00000475693 FOLH1Q04609 750 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 MAP7Q14244 749 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 NDUFA9Q16795 377 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 DRAXINQ8NBI3 349 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-217ENST00000475693 SUN3Q8TAQ9 357 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 DGCR14Q96DF8 476 aaKnown RBP17.02■□□□□ 0.32
ATG4B-217ENST00000475693 CCDC115Q96NT0 180 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 EGFL7Q9UHF1 273 aa17.02■□□□□ 0.32
ATG4B-217ENST00000475693 CEP250Q9BV73 2442 aa17.02■□□□□ 0.31
ATG4B-217ENST00000475693 A0A096LPI6 279 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 SPAARA0A1B0GVQ0 90 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 TGFBR3LH3BV60 316 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 CAPNS1P04632 268 aa17.01■□□□□ 0.31
ATG4B-217ENST00000475693 ZNF10P21506 573 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-217ENST00000475693 BUD31P41223 144 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms