RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 CCM2LQ9NUG4 571 aaPredicted RBP12.95□□□□□ -0.34
TRAF4-210ENST00000475329 CLCA2Q9UQC9 943 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 PCDHGB2Q9Y5G2 931 aa12.95□□□□□ -0.34
TRAF4-210ENST00000475329 A0A0A6YYC8 382 aaPredicted RBP12.94□□□□□ -0.34
TRAF4-210ENST00000475329 BLACEA4D250 179 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 WASHC1A8K0Z3 465 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 I3L1I5 382 aaPredicted RBP12.94□□□□□ -0.34
TRAF4-210ENST00000475329 CYR61O00622 381 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 DNAJB6O75190 326 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 CREG1O75629 220 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 MED26O95402 600 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 RETP07949 1114 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 C8orf89P0DMQ9 161 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 RNH1P13489 461 aaKnown RBP12.94□□□□□ -0.34
TRAF4-210ENST00000475329 IL10P22301 178 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 PCGF2P35227 344 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 GRK6P43250 576 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 PTDSS1P48651 473 aaKnown RBP12.94□□□□□ -0.34
TRAF4-210ENST00000475329 CCT3P49368 545 aaKnown RBP12.94□□□□□ -0.34
TRAF4-210ENST00000475329 MVDP53602 400 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 SIM1P81133 766 aaPredicted RBP12.94□□□□□ -0.34
TRAF4-210ENST00000475329 DUSP2Q05923 314 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 GPR19Q15760 415 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 CLPPQ16740 277 aaPredicted RBP12.94□□□□□ -0.34
TRAF4-210ENST00000475329 TBCELQ5QJ74 424 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 PLA2G2CQ5R387 149 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 COX20Q5RI15 118 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 RNF130Q86XS8 419 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 ADGRG5Q8IZF4 528 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 LRRC25Q8N386 305 aaPredicted RBP12.94□□□□□ -0.34
TRAF4-210ENST00000475329 C11orf65Q8NCR3 313 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 OR4D9Q8NGE8 314 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 SUN3Q8TAQ9 357 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 CANT1Q8WVQ1 401 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 TANKQ92844 425 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 SLCO4A1Q96BD0 722 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 ZNF681Q96N22 645 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 SPRTNQ9H040 489 aaPredicted RBP12.94□□□□□ -0.34
TRAF4-210ENST00000475329 SYNDIG1Q9H7V2 258 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 ARMC1Q9NVT9 282 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 RAPGEFL1Q9UHV5 662 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 ATXN7L1Q9ULK2 861 aaPredicted RBP12.94□□□□□ -0.34
TRAF4-210ENST00000475329 FAF1Q9UNN5 650 aaPredicted RBP12.94□□□□□ -0.34
TRAF4-210ENST00000475329 AURKCQ9UQB9 309 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 MAP4K5Q9Y4K4 846 aa12.94□□□□□ -0.34
TRAF4-210ENST00000475329 A0A1W2PQM1 296 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 CHST10O43529 356 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 FOXS1O43638 330 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 TNFRSF21O75509 655 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 BMP2P12643 396 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 ETFAP13804 333 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 VHLP40337 213 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 MAGEA8P43361 318 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 ITGA1P56199 1179 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 DSTNP60981 165 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 RBBP4Q09028 425 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 TP53BP2Q13625 1128 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 VEZF1Q14119 521 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 ADRM1Q16186 407 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 FAM214AQ32MH5 1076 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 ZNF750Q32MQ0 723 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 TLDC1Q6P9B6 456 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 BHLHB9Q6PI77 547 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 RNF111Q6ZNA4 994 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 PRR23CQ6ZRP0 262 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 SZRD1Q7Z422 152 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 CCDC116Q8IYX3 515 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 GPR135Q8IZ08 494 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 OR56A1Q8NGH5 318 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 OR1L3Q8NH93 324 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 SLC35G5Q96KT7 338 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 TMEM121BQ9BXQ6 578 aaPredicted RBP12.93□□□□□ -0.34
TRAF4-210ENST00000475329 IRF2BPLQ9H1B7 796 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 TMEM38AQ9H6F2 299 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 C3orf14Q9HBI5 128 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 C11orf16Q9NQ32 467 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 CUTCQ9NTM9 273 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 OLAHQ9NV23 265 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 GPATCH2Q9NW75 528 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 HCN3Q9P1Z3 774 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 MRPS33Q9Y291 106 aaKnown RBP12.93□□□□□ -0.34
TRAF4-210ENST00000475329 ZNF318Q5VUA4 2279 aa12.93□□□□□ -0.34
TRAF4-210ENST00000475329 A0A1W2PS29 197 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 LNP1A1A4G5 178 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 H0YIG0 161 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 H3BMH7 237 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 CASC3O15234 703 aaKnown RBP12.92□□□□□ -0.34
TRAF4-210ENST00000475329 FLRT2O43155 660 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 HNRNPRO43390 633 aaKnown RBP12.92□□□□□ -0.34
TRAF4-210ENST00000475329 FHP07954 510 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 NUDT7P0C024 238 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 FCGR1AP12314 374 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 CPMP14384 443 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 FOLR1P15328 257 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 PPP2R1BP30154 601 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 PRIM2P49643 509 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 ANXA11P50995 505 aaKnown RBP12.92□□□□□ -0.34
TRAF4-210ENST00000475329 XKP51811 444 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 CASP9P55211 416 aa12.92□□□□□ -0.34
TRAF4-210ENST00000475329 PRR5P85299 388 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms