RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 MLC1Q15049 377 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 SYT16Q17RD7 645 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 SPRED3Q2MJR0 410 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 NKAIN1Q4KMZ8 207 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 C3orf38Q5JPI3 329 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 LRIF1Q5T3J3 769 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 C1orf146Q5VVC0 180 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 ASRGL1Q7L266 308 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 IFNEQ86WN2 208 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 ULK2Q8IYT8 1036 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 CCDC116Q8IYX3 515 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 FBXW8Q8N3Y1 598 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 OR56A1Q8NGH5 318 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 MR1Q95460 341 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 MIEF2Q96C03 454 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 RBM18Q96H35 190 aaKnown RBP9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 MAGED4Q96JG8 741 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 SLC35G5Q96KT7 338 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 PTCHD1Q96NR3 888 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 ANKRD27Q96NW4 1050 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 SLC39A3Q9BRY0 314 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 INPP5KQ9BT40 448 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 DDA1Q9BW61 102 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 CADM1Q9BY67 442 aaKnown RBP9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 ALG2Q9H553 416 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 CACYBPQ9HB71 228 aaKnown RBP9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 ENAMQ9NRM1 1142 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 ZCCHC3Q9NUD5 404 aaKnown RBP9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 KCMF1Q9P0J7 381 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 MAP10Q9P2G4 905 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 NXT1Q9UKK6 140 aaKnown RBP9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 FAF1Q9UNN5 650 aaPredicted RBP9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 PADI2Q9Y2J8 665 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 RRP15Q9Y3B9 282 aaKnown RBP9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 PCDHB14Q9Y5E9 798 aa9.67□□□□□ -0.86
PRPF38A-202ENST00000474048 MYO1GB0I1T2 1018 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 CYR61O00622 381 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 HYAL3O43820 417 aaPredicted RBP9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 CTNSO60931 367 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 COQ9O75208 318 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 PDE5AO76074 875 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 HEXBP07686 556 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 TCN1P20061 433 aaPredicted RBP9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 RBMS1P29558 406 aaKnown RBP9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 CPOXP36551 454 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 CCT3P49368 545 aaKnown RBP9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 PRIM2P49643 509 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 KHKP50053 298 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 PDX1P52945 283 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 PRKAG1P54619 331 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 EEFSECP57772 596 aaKnown RBP9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 MTPNP58546 118 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 KCNJ2P63252 427 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 HBA1P69905 142 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 BNIP2Q12982 314 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 ZNHIT3Q15649 155 aaPredicted RBP9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 PRAMEF17Q5VTA0 474 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 MLIPQ5VWP3 458 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 CDCP2Q5VXM1 449 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 NANOGP8Q6NSW7 305 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 FAM180BQ6P0A1 224 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 ZNF551Q7Z340 670 aaPredicted RBP9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 TMPRSS12Q86WS5 348 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 OR4N5Q8IXE1 308 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 PRSS58Q8IYP2 241 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 ARHGEF39Q8N4T4 335 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 OR5AK3PQ8NH89 298 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 FBXO27Q8NI29 283 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 SFXN5Q8TD22 340 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 NUDT8Q8WV74 236 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 JADE3Q92613 823 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 NCLNQ969V3 563 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 FKBP10Q96AY3 582 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 ART5Q96L15 291 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 AMDHD1Q96NU7 426 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 SPATA9Q9BWV2 254 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 PAIP1Q9H074 479 aaKnown RBP9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 MUC13Q9H3R2 512 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 GLIPR2Q9H4G4 154 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 NANOGQ9H9S0 305 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 TPT1P8Q9HAU6 139 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 APMAPQ9HDC9 416 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 SLC52A3Q9NQ40 469 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 THUMPD1Q9NXG2 353 aaKnown RBP9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 VAPAQ9P0L0 249 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 C19orf25Q9UFG5 118 aaPredicted RBP9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 RAPGEFL1Q9UHV5 662 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 MKL2Q9ULH7 1088 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 EXO1Q9UQ84 846 aaKnown RBP9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 PCDHGA7Q9Y5G6 932 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 NUP210LQ5VU65 1888 aa9.66□□□□□ -0.86
PRPF38A-202ENST00000474048 GPR179Q6PRD1 2367 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 C5orf58C9J3I9 102 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 FAM227AF5H4B4 570 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 H3BMH7 237 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 MEN1O00255 615 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 SLC30A4O14863 429 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 EMC8O43402 210 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 FGF17O60258 216 aa9.65□□□□□ -0.86
PRPF38A-202ENST00000474048 BCAS2O75934 225 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms