RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 ST13P4Q8IZP2 240 aaPredicted RBP13.24□□□□□ -0.29
VAMP4-203ENST00000474047 TMEM178AQ8NBL3 297 aa13.24□□□□□ -0.29
VAMP4-203ENST00000474047 FAM98AQ8NCA5 519 aaKnown RBP13.24□□□□□ -0.29
VAMP4-203ENST00000474047 OR5L2Q8NGL0 311 aa13.24□□□□□ -0.29
VAMP4-203ENST00000474047 RIT1Q92963 219 aa13.24□□□□□ -0.29
VAMP4-203ENST00000474047 SIGLEC12Q96PQ1 595 aa13.24□□□□□ -0.29
VAMP4-203ENST00000474047 CNPPD1Q9BV87 410 aa13.24□□□□□ -0.29
VAMP4-203ENST00000474047 ACPTQ9BZG2 426 aa13.24□□□□□ -0.29
VAMP4-203ENST00000474047 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.24□□□□□ -0.29
VAMP4-203ENST00000474047 TEX10Q9NXF1 929 aaPredicted RBP13.24□□□□□ -0.29
VAMP4-203ENST00000474047 SLC17A7Q9P2U7 560 aa13.24□□□□□ -0.29
VAMP4-203ENST00000474047 NTNG1Q9Y2I2 539 aa13.24□□□□□ -0.29
VAMP4-203ENST00000474047 C1orf226A1L170 272 aa13.23□□□□□ -0.29
VAMP4-203ENST00000474047 WASHC1A8K0Z3 465 aa13.23□□□□□ -0.29
VAMP4-203ENST00000474047 ITGA10O75578 1167 aa13.23□□□□□ -0.29
VAMP4-203ENST00000474047 CRYABP02511 175 aaKnown RBP13.23□□□□□ -0.29
VAMP4-203ENST00000474047 MYZAPP0CAP1 466 aa13.23□□□□□ -0.29
VAMP4-203ENST00000474047 CHN1P15882 459 aa13.23□□□□□ -0.29
VAMP4-203ENST00000474047 ALDH3A1P30838 453 aa13.23□□□□□ -0.29
VAMP4-203ENST00000474047 SSR4P51571 173 aa13.23□□□□□ -0.29
VAMP4-203ENST00000474047 GPR143P51810 404 aa13.23□□□□□ -0.29
VAMP4-203ENST00000474047 HMGCS1Q01581 520 aa13.23□□□□□ -0.29
VAMP4-203ENST00000474047 ZNF267Q14586 743 aaPredicted RBP13.23□□□□□ -0.29
VAMP4-203ENST00000474047 MAPKAPK3Q16644 382 aa13.23□□□□□ -0.29
VAMP4-203ENST00000474047 CHTF18Q8WVB6 975 aa13.23□□□□□ -0.29
VAMP4-203ENST00000474047 FAR1Q8WVX9 515 aa13.23□□□□□ -0.29
VAMP4-203ENST00000474047 SENP5Q96HI0 755 aaPredicted RBP13.23□□□□□ -0.29
VAMP4-203ENST00000474047 LIN28AQ9H9Z2 209 aaKnown RBP13.23□□□□□ -0.29
VAMP4-203ENST00000474047 EML4Q9HC35 981 aaKnown RBP13.23□□□□□ -0.29
VAMP4-203ENST00000474047 RRAGDQ9NQL2 400 aaPredicted RBP13.23□□□□□ -0.29
VAMP4-203ENST00000474047 OLAHQ9NV23 265 aa13.23□□□□□ -0.29
VAMP4-203ENST00000474047 ERVK-11Q9UQG0 969 aa13.23□□□□□ -0.29
VAMP4-203ENST00000474047 YARS2Q9Y2Z4 477 aaKnown RBP13.23□□□□□ -0.29
VAMP4-203ENST00000474047 FIS1Q9Y3D6 152 aa13.23□□□□□ -0.29
VAMP4-203ENST00000474047 RP1L1Q8IWN7 2480 aaPredicted RBP13.22□□□□□ -0.29
VAMP4-203ENST00000474047 GOLGA6L10A6NI86 522 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 WWP2O00308 870 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 CTIFO43310 598 aaKnown RBP13.22□□□□□ -0.29
VAMP4-203ENST00000474047 PCDH7O60245 1069 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 DDAH2O95865 285 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 CHEK2O96017 543 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 SLC35E2P0CK97 266 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 UROSP10746 265 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 SERPINB3P29508 390 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 UQCRFS1P47985 274 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 HLCSP50747 726 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 XKP51811 444 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 FOXA1P55317 472 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 TRA2BP62995 288 aaKnown RBP13.22□□□□□ -0.29
VAMP4-203ENST00000474047 RNF4P78317 190 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 SLC25A25Q6KCM7 469 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 ZNF321PQ8N8H1 164 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 PPP1R14CQ8TAE6 165 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 PRR7Q8TB68 274 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 DOK4Q8TEW6 326 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 ASB15Q8WXK1 588 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 UCN3Q969E3 161 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 ZBTB9Q96C00 473 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 TRMOQ9BU70 441 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 GATA5Q9BWX5 397 aaPredicted RBP13.22□□□□□ -0.29
VAMP4-203ENST00000474047 PFDN4Q9NQP4 134 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 MCM8Q9UJA3 840 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 ZNF223Q9UK11 482 aaPredicted RBP13.22□□□□□ -0.29
VAMP4-203ENST00000474047 PCDHA9Q9Y5H5 950 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 FLNBO75369 2602 aaKnown RBP13.22□□□□□ -0.29
VAMP4-203ENST00000474047 ANKUB1A6NFN9 424 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 PRKNO60260 465 aaPredicted RBP13.22□□□□□ -0.29
VAMP4-203ENST00000474047 ERAL1O75616 437 aaKnown RBP13.22□□□□□ -0.29
VAMP4-203ENST00000474047 SLC25A12O75746 678 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 OR2J2O76002 312 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 SP1P08047 785 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 NT5EP21589 574 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 ERVK-8P63133 956 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 MRPL49Q13405 166 aaKnown RBP13.22□□□□□ -0.29
VAMP4-203ENST00000474047 ZNF468Q5VIY5 522 aaPredicted RBP13.22□□□□□ -0.29
VAMP4-203ENST00000474047 HOMEZQ8IX15 550 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 CYP4Z2PQ8N1L4 340 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 MDS2Q8NDY4 140 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 DNAJB8Q8NHS0 232 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 ZNF721Q8TF20 911 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 TM4SF18Q96CE8 201 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 KLHL29Q96CT2 875 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 APIPQ96GX9 242 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 FBXL20Q96IG2 436 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 ZIM3Q96PE6 472 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 MECRQ9BV79 373 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 MYOTQ9UBF9 498 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 ERVK-19Q9WJR5 959 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 PCDHGB6Q9Y5F9 930 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 ZNF780BQ9Y6R6 833 aa13.22□□□□□ -0.29
VAMP4-203ENST00000474047 SHANK1Q9Y566 2161 aa13.21□□□□□ -0.29
VAMP4-203ENST00000474047 SERTM1A2A2V5 107 aa13.21□□□□□ -0.3
VAMP4-203ENST00000474047 A8MVJ9 347 aa13.21□□□□□ -0.3
VAMP4-203ENST00000474047 AZIN1O14977 448 aa13.21□□□□□ -0.3
VAMP4-203ENST00000474047 CREB1P16220 341 aa13.21□□□□□ -0.3
VAMP4-203ENST00000474047 PORP16435 677 aaPredicted RBP13.21□□□□□ -0.3
VAMP4-203ENST00000474047 GALNSP34059 522 aa13.21□□□□□ -0.3
VAMP4-203ENST00000474047 TRHRP34981 398 aaPredicted RBP13.21□□□□□ -0.3
VAMP4-203ENST00000474047 EIF2S3LQ2VIR3 472 aaKnown RBP13.21□□□□□ -0.3
VAMP4-203ENST00000474047 FHL5Q5TD97 284 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms