RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 GLOD5A6NK44 160 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 A8MUA0 341 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 SLCO1B7G3V0H7 640 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 MASP2O00187 686 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 CDK2AP1O14519 115 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 PGRMC2O15173 223 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 OR10H2O60403 315 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 DPM1O60762 260 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 PRKRAO75569 313 aaKnown RBP14.12□□□□□ -0.15
SNX13-205ENST00000471744 IL3P08700 152 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 SLC35E2P0CK97 266 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 ITGAMP11215 1152 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 NR1D1P20393 614 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 CLCN2P51788 898 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 HK2P52789 917 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 ID2Q02363 134 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 MAD2L1Q13257 205 aaPredicted RBP14.12□□□□□ -0.15
SNX13-205ENST00000471744 SMU1Q2TAY7 513 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 ASB18Q6ZVZ8 466 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 OR4N5Q8IXE1 308 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 LGI4Q8N135 537 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 SLC5A8Q8N695 610 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 NFAM1Q8NET5 270 aaPredicted RBP14.12□□□□□ -0.15
SNX13-205ENST00000471744 BRIX1Q8TDN6 353 aaKnown RBP14.12□□□□□ -0.15
SNX13-205ENST00000471744 ELP5Q8TE02 316 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 DYDC1Q8WWB3 177 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 ZNF75CPQ92670 426 aaPredicted RBP14.12□□□□□ -0.15
SNX13-205ENST00000471744 VMP1Q96GC9 406 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 EBPLQ9BY08 206 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 KCNK13Q9HB14 408 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 MED4Q9NPJ6 270 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 GIMAP4Q9NUV9 329 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 INTS9Q9NV88 658 aaKnown RBP14.12□□□□□ -0.15
SNX13-205ENST00000471744 CES1P1Q9UKY3 287 aa14.12□□□□□ -0.15
SNX13-205ENST00000471744 POLR3HQ9Y535 204 aaPredicted RBP14.12□□□□□ -0.15
SNX13-205ENST00000471744 C17orf105B2RV13 164 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 VPS4BO75351 444 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 CPMP14384 443 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 PORP16435 677 aaPredicted RBP14.11□□□□□ -0.15
SNX13-205ENST00000471744 DDX5P17844 614 aaKnown RBP14.11□□□□□ -0.15
SNX13-205ENST00000471744 SOX11P35716 441 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 ASMTP46597 345 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 ALDH9A1P49189 494 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 RPL38P63173 70 aaKnown RBP14.11□□□□□ -0.15
SNX13-205ENST00000471744 OCRLQ01968 901 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 MFAP5Q13361 173 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 RAPSNQ13702 412 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 SPRED3Q2MJR0 410 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 GALNTL6Q49A17 601 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 SOWAHCQ53LP3 525 aaPredicted RBP14.11□□□□□ -0.15
SNX13-205ENST00000471744 C6orf163Q5TEZ5 329 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 H3F3CQ6NXT2 135 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 IGFL3Q6UXB1 125 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 LRRC34Q8IZ02 419 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 LRRC8CQ8TDW0 803 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 PTPMT1Q8WUK0 201 aaPredicted RBP14.11□□□□□ -0.15
SNX13-205ENST00000471744 PSMF1Q92530 271 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 KLHL29Q96CT2 875 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 TUBGCP3Q96CW5 907 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 ZNF354BQ96LW1 612 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 ZNF395Q9H8N7 513 aaPredicted RBP14.11□□□□□ -0.15
SNX13-205ENST00000471744 MIEF1Q9NQG6 463 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 ZNF71Q9NQZ8 489 aaPredicted RBP14.11□□□□□ -0.15
SNX13-205ENST00000471744 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.11□□□□□ -0.15
SNX13-205ENST00000471744 ABI3Q9P2A4 366 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 COPS7AQ9UBW8 275 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 ZNF780BQ9Y6R6 833 aa14.11□□□□□ -0.15
SNX13-205ENST00000471744 TRPC5OSA6NMA1 111 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 ERAL1O75616 437 aaKnown RBP14.1□□□□□ -0.15
SNX13-205ENST00000471744 CELA2AP08217 269 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 PCSK2P16519 638 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 CSNK2A2P19784 350 aaPredicted RBP14.1□□□□□ -0.15
SNX13-205ENST00000471744 DDCP20711 480 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 XKP51811 444 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 C2orf80Q0P641 193 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 PDCD2Q16342 344 aaPredicted RBP14.1□□□□□ -0.15
SNX13-205ENST00000471744 RFTN2Q52LD8 501 aaPredicted RBP14.1□□□□□ -0.15
SNX13-205ENST00000471744 C6orf136Q5SQH8 315 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 ABHD17BQ5VST6 288 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 FAM71E1Q6IPT2 247 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 IGFL2Q6UWQ7 119 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 ZADH2Q8N4Q0 377 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 ARFGAP2Q8N6H7 521 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 SIRT6Q8N6T7 355 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 APCDD1LQ8NCL9 501 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 OR8K3Q8NH51 312 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.1□□□□□ -0.153e-7■■■■■ 37.7
SNX13-205ENST00000471744 NCLNQ969V3 563 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 ZNF764Q96H86 408 aaPredicted RBP14.1□□□□□ -0.15
SNX13-205ENST00000471744 BBC3Q96PG8 261 aaPredicted RBP14.1□□□□□ -0.15
SNX13-205ENST00000471744 DEFB126Q9BYW3 111 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 SEMA4CQ9C0C4 833 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 RYDENQ9NUL5 291 aaKnown RBP14.1□□□□□ -0.15
SNX13-205ENST00000471744 PTGFRNQ9P2B2 879 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 HEY2Q9UBP5 337 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 UTS2RQ9UKP6 389 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 ENTPD4Q9Y227 616 aa14.1□□□□□ -0.15
SNX13-205ENST00000471744 ATP6AP2A0A1C7CYW4 349 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 HDAC3O15379 428 aa14.09□□□□□ -0.15
SNX13-205ENST00000471744 PEX11AO75192 247 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms