RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 GLOD5A6NK44 160 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 WASH4PA8MWX3 477 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 C6orf47O95873 294 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 CHRNB2P17787 502 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 CERS1P27544 350 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 ACVR1BP36896 505 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 PITPNBP48739 271 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 PTH2RP49190 550 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 VEGFCP49767 419 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 NKPD1Q17RQ9 610 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 GPRC6AQ5T6X5 926 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 OR2T5Q6IEZ7 315 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 CREB3L2Q70SY1 520 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 SERPINA12Q8IW75 414 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 OR2T29Q8NH02 315 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 CYB5D2Q8WUJ1 264 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 ARL11Q969Q4 196 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 NTAN1Q96AB6 310 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 C3orf49Q96BT1 292 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 P2RY13Q9BPV8 354 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 GINS3Q9BRX5 216 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 ST6GALNAC5Q9BVH7 336 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 KLHL13Q9P2N7 655 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 SRRDQ9UH36 339 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 CXCL11O14625 94 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 TPSB2P20231 275 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 KITLGP21583 273 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 SERPINF1P36955 418 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 PTGER3P43115 390 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 OAZ1P54368 228 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 CDK6Q00534 326 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 FMO1Q01740 532 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 TPSAB1Q15661 275 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 HYAL4Q2M3T9 481 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 PTCHD3Q3KNS1 767 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 ZNF404Q494X3 552 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 LIPKQ5VXJ0 399 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 SMYD5Q6GMV2 418 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 KCTD18Q6PI47 426 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-210ENST00000471181 C3P1Q6ZMU1 363 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 HMGN2P46Q86SG4 172 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 PRELID2Q8N945 189 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 DENND1AQ8TEH3 1009 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 SORCS1Q8WY21 1168 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 C7orf26Q96N11 449 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 TMEM74Q96NL1 305 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 SYT3Q9BQG1 590 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 CCM2Q9BSQ5 444 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 CCDC106Q9BWC9 280 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 LRRC3Q9BY71 257 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 PATZ1Q9HBE1 687 aaKnown RBP6.63□□□□□ -1.35
BRCA1-210ENST00000471181 ARMC1Q9NVT9 282 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 OAZ3Q9UMX2 235 aa6.63□□□□□ -1.35
BRCA1-210ENST00000471181 H3BSA7 217 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 MEIS2O14770 477 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 WNT9AO14904 365 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 LRRTM2O43300 516 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 TXNDC12O95881 172 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 CDK1P06493 297 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 GCH1P30793 250 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 POU6F2P78424 691 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-210ENST00000471181 SCAPQ12770 1279 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 TMEM41BQ5BJD5 291 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 TRIM61Q5EBN2 209 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 RNF130Q86XS8 419 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 REM2Q8IYK8 340 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-210ENST00000471181 DNAJB8Q8NHS0 232 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 TSPEARQ8WU66 669 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 MYLIPQ8WY64 445 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 LMF1Q96S06 567 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 SLC6A16Q9GZN6 736 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 ZNF334Q9HCZ1 680 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-210ENST00000471181 SDHAF2Q9NX18 166 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 PAQR5Q9NXK6 330 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-210ENST00000471181 ZNF230Q9UIE0 474 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-210ENST00000471181 MED16Q9Y2X0 877 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 TMEM98Q9Y2Y6 226 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 NALCNQ8IZF0 1738 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 GXYLT2A0PJZ3 443 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 TTLL8A6PVC2 850 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 CAPN5O15484 640 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-210ENST00000471181 TRAF3IP2O43734 574 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-210ENST00000471181 NPHS1O60500 1241 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 CRTAPO75718 401 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-210ENST00000471181 ALDOBP05062 364 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 PRPS1L1P21108 318 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 PRKACGP22612 351 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 TGM1P22735 817 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 F2RP25116 425 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 GDI1P31150 447 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 STT3AP46977 705 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 THBS3P49746 956 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 ACY1Q03154 408 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 LRIT3Q3SXY7 679 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 TANGO2Q6ICL3 276 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 FAM198BQ6UWH4 519 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 BAIAP2L2Q6UXY1 529 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 PLEKHG7Q6ZR37 379 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 NAA40Q86UY6 237 aa6.62□□□□□ -1.35
BRCA1-210ENST00000471181 THOC6Q86W42 341 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms