RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 AMDHD1Q96NU7 426 aa9.19□□□□□ -0.94
CCM2-204ENST00000470837 ANKRD27Q96NW4 1050 aa9.19□□□□□ -0.94
CCM2-204ENST00000470837 DGAT2Q96PD7 388 aa9.19□□□□□ -0.94
CCM2-204ENST00000470837 KCTD14Q9BQ13 255 aaPredicted RBP9.19□□□□□ -0.94
CCM2-204ENST00000470837 SLC39A3Q9BRY0 314 aa9.19□□□□□ -0.94
CCM2-204ENST00000470837 SLC35A5Q9BS91 424 aa9.19□□□□□ -0.94
CCM2-204ENST00000470837 CADM1Q9BY67 442 aaKnown RBP9.19□□□□□ -0.94
CCM2-204ENST00000470837 PAIP1Q9H074 479 aaKnown RBP9.19□□□□□ -0.94
CCM2-204ENST00000470837 GLIPR2Q9H4G4 154 aa9.19□□□□□ -0.94
CCM2-204ENST00000470837 NANOGQ9H9S0 305 aa9.19□□□□□ -0.94
CCM2-204ENST00000470837 APMAPQ9HDC9 416 aa9.19□□□□□ -0.94
CCM2-204ENST00000470837 C14orf105Q9NVL8 296 aa9.19□□□□□ -0.94
CCM2-204ENST00000470837 MMACHCQ9Y4U1 282 aa9.19□□□□□ -0.94
CCM2-204ENST00000470837 PCDHB14Q9Y5E9 798 aa9.19□□□□□ -0.94
CCM2-204ENST00000470837 PCDHGA7Q9Y5G6 932 aa9.19□□□□□ -0.94
CCM2-204ENST00000470837 WDFY4Q6ZS81 3184 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 RNF103-CHMP3A0A140T963 221 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 TMEM247A6NEH6 219 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 MYO1GB0I1T2 1018 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 MEN1O00255 615 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 GSTA4O15217 222 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 LDB3O75112 727 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 DNAJB6O75190 326 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 MED26O95402 600 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 SLC35E2P0CK97 266 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 TNNI3P19429 210 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 TCN1P20061 433 aaPredicted RBP9.18□□□□□ -0.94
CCM2-204ENST00000470837 NT5EP21589 574 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 SLC6A2P23975 617 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 FRKP42685 505 aaPredicted RBP9.18□□□□□ -0.94
CCM2-204ENST00000470837 CRATP43155 626 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 CCT3P49368 545 aaKnown RBP9.18□□□□□ -0.94
CCM2-204ENST00000470837 PRIM2P49643 509 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 PCBP4P57723 403 aaKnown RBP9.18□□□□□ -0.94
CCM2-204ENST00000470837 EEFSECP57772 596 aaKnown RBP9.18□□□□□ -0.94
CCM2-204ENST00000470837 MTPNP58546 118 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 SNRPNP63162 240 aaKnown RBP9.18□□□□□ -0.94
CCM2-204ENST00000470837 KCNJ2P63252 427 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 DMTNQ08495 405 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 TP53BP2Q13625 1128 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 CYP51A1Q16850 503 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 SYT16Q17RD7 645 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 RUNDC3AQ59EK9 446 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 C1orf146Q5VVC0 180 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 MLIPQ5VWP3 458 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 ZNF551Q7Z340 670 aaPredicted RBP9.18□□□□□ -0.94
CCM2-204ENST00000470837 IFNEQ86WN2 208 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 C10orf67Q8IYJ2 551 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 GALNT15Q8N3T1 639 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 DTWD1Q8N5C7 304 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 BMPERQ8N8U9 685 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 OR56A1Q8NGH5 318 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 GOT1L1Q8NHS2 421 aaPredicted RBP9.18□□□□□ -0.94
CCM2-204ENST00000470837 METTL21AQ8WXB1 218 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 MR1Q95460 341 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 CCDC124Q96CT7 223 aaKnown RBP9.18□□□□□ -0.94
CCM2-204ENST00000470837 FAM120BQ96EK7 910 aaKnown RBP9.18□□□□□ -0.94
CCM2-204ENST00000470837 CNRIP1Q96F85 164 aaPredicted RBP9.18□□□□□ -0.94
CCM2-204ENST00000470837 MAGED4Q96JG8 741 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 LRGUKQ96M69 825 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 PTCHD1Q96NR3 888 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 PHF12Q96QT6 1004 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 PHOX2BQ99453 314 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 GPATCH1Q9BRR8 931 aaKnown RBP9.18□□□□□ -0.94
CCM2-204ENST00000470837 DDA1Q9BW61 102 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 TRIM15Q9C019 465 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 TPT1P8Q9HAU6 139 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 SERHLQ9NQF3 203 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 ZCCHC3Q9NUD5 404 aaKnown RBP9.18□□□□□ -0.94
CCM2-204ENST00000470837 DDX18Q9NVP1 670 aaKnown RBP9.18□□□□□ -0.94
CCM2-204ENST00000470837 TOR4AQ9NXH8 423 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 VAPAQ9P0L0 249 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 SLAMF8Q9P0V8 285 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 TMEM181Q9P2C4 612 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 HEATR5BQ9P2D3 2071 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 NXT1Q9UKK6 140 aaKnown RBP9.18□□□□□ -0.94
CCM2-204ENST00000470837 CES1P1Q9UKY3 287 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 LAMA1P25391 3075 aa9.18□□□□□ -0.94
CCM2-204ENST00000470837 MUC6Q6W4X9 2439 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 WASHC1A8K0Z3 465 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 FXYD1O00168 92 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 SLC30A4O14863 429 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 EMC8O43402 210 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 HYAL3O43820 417 aaPredicted RBP9.17□□□□□ -0.94
CCM2-204ENST00000470837 FGF17O60258 216 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 SCN2BO60939 215 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 PDE5AO76074 875 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 TIAF1O95411 115 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 ALBP02768 609 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 ATP1B1P05026 303 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 HEXBP07686 556 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 ITIH1P19827 911 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 RBMS1P29558 406 aaKnown RBP9.17□□□□□ -0.94
CCM2-204ENST00000470837 CDKN2CP42773 168 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 GCGRP47871 477 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 PRKAG1P54619 331 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 ID2Q02363 134 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 LIPEQ05469 1076 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 VAC14Q08AM6 782 aa9.17□□□□□ -0.94
CCM2-204ENST00000470837 BNIP2Q12982 314 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms