RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 MAGEA6P43360 314 aa17.36■□□□□ 0.37
NCKIPSD-209ENST00000470006 VASNQ6EMK4 673 aa17.36■□□□□ 0.37
NCKIPSD-209ENST00000470006 ABHD17CQ6PCB6 329 aa17.36■□□□□ 0.37
NCKIPSD-209ENST00000470006 SLC29A4Q7RTT9 530 aa17.36■□□□□ 0.37
NCKIPSD-209ENST00000470006 OR4N5Q8IXE1 308 aa17.36■□□□□ 0.37
NCKIPSD-209ENST00000470006 RNF10Q8N5U6 811 aaKnown RBP17.36■□□□□ 0.37
NCKIPSD-209ENST00000470006 C9orf106Q8NAJ2 232 aa17.36■□□□□ 0.37
NCKIPSD-209ENST00000470006 PPWD1Q96BP3 646 aaKnown RBP17.36■□□□□ 0.37
NCKIPSD-209ENST00000470006 RBM18Q96H35 190 aaKnown RBP17.36■□□□□ 0.37
NCKIPSD-209ENST00000470006 SECISBP2Q96T21 854 aaKnown RBP17.36■□□□□ 0.37
NCKIPSD-209ENST00000470006 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.36■□□□□ 0.37
NCKIPSD-209ENST00000470006 CNOT11Q9UKZ1 510 aaKnown RBP17.36■□□□□ 0.37
NCKIPSD-209ENST00000470006 DSCAMO60469 2012 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 IQANK1A0A1B0GTG1 560 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 CNOT4O95628 575 aaKnown RBP17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 AHSGP02765 367 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 FBXO45P0C2W1 286 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 CYP4B1P13584 511 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 GSTM2P28161 218 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 GABRB3P28472 473 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 CPOXP36551 454 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 CDK9P50750 372 aaKnown RBP17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 FOXF2Q12947 444 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 ACKR1Q16570 336 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 TBCELQ5QJ74 424 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 SBSNQ6UWP8 590 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 LYPD8Q6UX82 237 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 SLCO4C1Q6ZQN7 724 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 DOK4Q8TEW6 326 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 ABTB1Q969K4 478 aaPredicted RBP17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 PIK3IP1Q96FE7 263 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 ART5Q96L15 291 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 F2RL3Q96RI0 385 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 MAPKAP1Q9BPZ7 522 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 UGT2B28Q9BY64 529 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 LYRM4Q9HD34 91 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 IKZF3Q9UKT9 509 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 GUCA1BQ9UMX6 200 aa17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 SONP18583 2426 aaKnown RBP17.35■□□□□ 0.37
NCKIPSD-209ENST00000470006 HRKO00198 91 aa17.34■□□□□ 0.37
NCKIPSD-209ENST00000470006 TP53I11O14683 189 aa17.34■□□□□ 0.37
NCKIPSD-209ENST00000470006 CLGNO14967 610 aa17.34■□□□□ 0.37
NCKIPSD-209ENST00000470006 TRIM3O75382 744 aaPredicted RBP17.34■□□□□ 0.37
NCKIPSD-209ENST00000470006 CCDC175P0C221 793 aa17.34■□□□□ 0.37
NCKIPSD-209ENST00000470006 CPN2P22792 545 aa17.34■□□□□ 0.37
NCKIPSD-209ENST00000470006 GDF5P43026 501 aa17.34■□□□□ 0.37
NCKIPSD-209ENST00000470006 HMBOX1Q6NT76 420 aa17.34■□□□□ 0.37
NCKIPSD-209ENST00000470006 FRA10AC1Q70Z53 315 aa17.34■□□□□ 0.37
NCKIPSD-209ENST00000470006 PACS2Q86VP3 889 aa17.34■□□□□ 0.37
NCKIPSD-209ENST00000470006 MCUQ8NE86 351 aa17.34■□□□□ 0.37
NCKIPSD-209ENST00000470006 C7orf57Q8NEG2 295 aa17.34■□□□□ 0.37
NCKIPSD-209ENST00000470006 ANKRD9Q96BM1 317 aaPredicted RBP17.34■□□□□ 0.37
NCKIPSD-209ENST00000470006 INTS12Q96CB8 462 aaKnown RBP17.34■□□□□ 0.37
NCKIPSD-209ENST00000470006 WDYHV1Q96HA8 205 aa17.34■□□□□ 0.37
NCKIPSD-209ENST00000470006 GNRHR2Q96P88 292 aa17.34■□□□□ 0.37
NCKIPSD-209ENST00000470006 SFXN3Q9BWM7 321 aa17.34■□□□□ 0.37
NCKIPSD-209ENST00000470006 ROGDIQ9GZN7 287 aa17.34■□□□□ 0.37
NCKIPSD-209ENST00000470006 PPANQ9NQ55 473 aaKnown RBP17.34■□□□□ 0.37
NCKIPSD-209ENST00000470006 VWA7Q9Y334 891 aa17.34■□□□□ 0.37
NCKIPSD-209ENST00000470006 NPEPPSL1A6NEC2 478 aa17.33■□□□□ 0.36
NCKIPSD-209ENST00000470006 CDC7O00311 574 aa17.33■□□□□ 0.36
NCKIPSD-209ENST00000470006 HPNP05981 417 aa17.33■□□□□ 0.36
NCKIPSD-209ENST00000470006 STT3AP46977 705 aa17.33■□□□□ 0.36
NCKIPSD-209ENST00000470006 KCNC1P48547 511 aa17.33■□□□□ 0.36
NCKIPSD-209ENST00000470006 DIO3P55073 304 aa17.33■□□□□ 0.36
NCKIPSD-209ENST00000470006 C18orf21Q32NC0 220 aaPredicted RBP17.33■□□□□ 0.36
NCKIPSD-209ENST00000470006 ADPRMQ3LIE5 342 aa17.33■□□□□ 0.36
NCKIPSD-209ENST00000470006 EIPR1Q53HC9 387 aa17.33■□□□□ 0.36
NCKIPSD-209ENST00000470006 WIPI1Q5MNZ9 446 aaPredicted RBP17.33■□□□□ 0.36
NCKIPSD-209ENST00000470006 DCST1Q5T197 706 aa17.33■□□□□ 0.36
NCKIPSD-209ENST00000470006 BICRALQ6AI39 1079 aa17.33■□□□□ 0.36
NCKIPSD-209ENST00000470006 TAGAPQ8N103 731 aa17.33■□□□□ 0.36
NCKIPSD-209ENST00000470006 AGGF1Q8N302 714 aaeCLIP17.33■□□□□ 0.36
NCKIPSD-209ENST00000470006 SLC44A1Q8WWI5 657 aa17.33■□□□□ 0.36
NCKIPSD-209ENST00000470006 SIGLEC10Q96LC7 697 aa17.33■□□□□ 0.36
NCKIPSD-209ENST00000470006 RILPQ96NA2 401 aa17.33■□□□□ 0.36
NCKIPSD-209ENST00000470006 KCNC2Q96PR1 638 aa17.33■□□□□ 0.36
NCKIPSD-209ENST00000470006 PRDM7Q9NQW5 492 aa17.33■□□□□ 0.36
NCKIPSD-209ENST00000470006 CAPN14A8MX76 684 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 SNPHO15079 494 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 FGF17O60258 216 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 IGKV3-11P04433 115 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 PGAM1P18669 254 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 GCKP35557 465 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 HNMTP50135 292 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 PLIN5Q00G26 463 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 SRYQ05066 204 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 CRYMQ14894 314 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 NTRK2Q16620 822 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 PPP1R3AQ16821 1122 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 ADNP2Q6IQ32 1131 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 TMEM64Q6YI46 380 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 RNF111Q6ZNA4 994 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 PHC2Q8IXK0 858 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 ZNF441Q8N8Z8 693 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 KRT12Q99456 494 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 TM9SF2Q99805 663 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 NT5DC2Q9H857 520 aa17.32■□□□□ 0.36
NCKIPSD-209ENST00000470006 ZNF226Q9NYT6 803 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms