RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 MLYCDO95822 493 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 PROCP04070 461 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 KRT4P19013 534 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 HMOX2P30519 316 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 SOX3P41225 446 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 CCT5P48643 541 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 MEOX1P50221 254 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 MAPK12P53778 367 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 ERVK-8P63133 956 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 RELNP78509 3460 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 PLIN5Q00G26 463 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 BTKQ06187 659 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 GALNT1Q10472 559 aaPredicted RBP10.71□□□□□ -0.69
CDHR3-205ENST00000468143 TBL3Q12788 808 aaKnown RBP10.71□□□□□ -0.69
CDHR3-205ENST00000468143 RASA2Q15283 850 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 RNFT1Q5M7Z0 435 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 NDUFAF5Q5TEU4 345 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 ZYG11AQ6WRX3 759 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 PAGE2Q7Z2X7 111 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 FJX1Q86VR8 437 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 TDRPQ86YL5 185 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 CPAMD8Q8IZJ3 1885 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 ST13P4Q8IZP2 240 aaPredicted RBP10.71□□□□□ -0.69
CDHR3-205ENST00000468143 C1orf52Q8N6N3 182 aaKnown RBP10.71□□□□□ -0.69
CDHR3-205ENST00000468143 FAM98AQ8NCA5 519 aaKnown RBP10.71□□□□□ -0.69
CDHR3-205ENST00000468143 OR5L2Q8NGL0 311 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 ASB15Q8WXK1 588 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.71□□□□□ -0.69
CDHR3-205ENST00000468143 RIT1Q92963 219 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 ZNF382Q96SR6 550 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 SHCBP1LQ9BZQ2 653 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 GSTO2Q9H4Y5 243 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 MID1IP1Q9NPA3 183 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 HPF1Q9NWY4 346 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 COPS7AQ9UBW8 275 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 ADAM29Q9UKF5 820 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 GRID1Q9ULK0 1009 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 ERVK-19Q9WJR5 959 aa10.71□□□□□ -0.69
CDHR3-205ENST00000468143 WIPF3A6NGB9 483 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 G3V3Y1 287 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 KLRC4-KLRK1H3BQV0 150 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 COPEO14579 308 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 DYRK3O43781 588 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 ZNF500O60304 480 aaPredicted RBP10.7□□□□□ -0.7
CDHR3-205ENST00000468143 PLIN3O60664 434 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 ULK1O75385 1050 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 KRT6AP02538 564 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 KRT6BP04259 564 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 IGKV3-11P04433 115 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 STSP08842 583 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 SLC35E2P0CK97 266 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 GP1BBP13224 206 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 CPA3P15088 417 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 PIK3R1P27986 724 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 SERPINB3P29508 390 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 PTGER1P34995 402 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 CRHR1P34998 444 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 KRT6CP48668 564 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 XKP51811 444 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 NAGLUP54802 743 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 FOXA1P55317 472 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 HSF1Q00613 529 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 HMGCS1Q01581 520 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 ASPHQ12797 758 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 LCP2Q13094 533 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 BIKQ13323 160 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 C4orf17Q53FE4 359 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 C10orf62Q5T681 223 aaPredicted RBP10.7□□□□□ -0.7
CDHR3-205ENST00000468143 OR52E8Q6IFG1 317 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 FAM180BQ6P0A1 224 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 C9orf40Q8IXQ3 194 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 C7orf57Q8NEG2 295 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 OR4K14Q8NGD5 310 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 TM4SF18Q96CE8 201 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 GPR137Q96N19 417 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 BRF2Q9HAW0 419 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 TIMMDC1Q9NPL8 285 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 DEPPQ9NTK1 212 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 NMRK1Q9NWW6 199 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 VPS29Q9UBQ0 182 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 PLEKHB1Q9UF11 243 aaPredicted RBP10.7□□□□□ -0.7
CDHR3-205ENST00000468143 KLF13Q9Y2Y9 288 aaPredicted RBP10.7□□□□□ -0.7
CDHR3-205ENST00000468143 PCDHA9Q9Y5H5 950 aa10.7□□□□□ -0.7
CDHR3-205ENST00000468143 PINLYPA6NC86 204 aa10.69□□□□□ -0.7
CDHR3-205ENST00000468143 CDK2AP1O14519 115 aa10.69□□□□□ -0.7
CDHR3-205ENST00000468143 ASNA1O43681 348 aa10.69□□□□□ -0.7
CDHR3-205ENST00000468143 CDH16O75309 829 aa10.69□□□□□ -0.7
CDHR3-205ENST00000468143 ERAL1O75616 437 aaKnown RBP10.69□□□□□ -0.7
CDHR3-205ENST00000468143 PDE9AO76083 593 aa10.69□□□□□ -0.7
CDHR3-205ENST00000468143 ESRRBO95718 433 aa10.69□□□□□ -0.7
CDHR3-205ENST00000468143 CLDN1O95832 211 aa10.69□□□□□ -0.7
CDHR3-205ENST00000468143 CT62P0C5K7 136 aa10.69□□□□□ -0.7
CDHR3-205ENST00000468143 ZNF24P17028 368 aa10.69□□□□□ -0.7
CDHR3-205ENST00000468143 NT5EP21589 574 aa10.69□□□□□ -0.7
CDHR3-205ENST00000468143 COL8A1P27658 744 aa10.69□□□□□ -0.7
CDHR3-205ENST00000468143 SSTR4P31391 388 aa10.69□□□□□ -0.7
CDHR3-205ENST00000468143 DEKP35659 375 aaKnown RBP10.69□□□□□ -0.7
CDHR3-205ENST00000468143 FEN1P39748 380 aaKnown RBP10.69□□□□□ -0.7
CDHR3-205ENST00000468143 ALDH9A1P49189 494 aa10.69□□□□□ -0.7
CDHR3-205ENST00000468143 PKNOX1P55347 436 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms