RNA–Protein interactions for RNA: ENST00000467911.1

NCK1-203, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-203ENST00000467911 CCDC28BQ9BUN5 200 aa3.81□□□□□ -1.8
NCK1-203ENST00000467911 DDX47Q9H0S4 455 aaKnown RBP3.81□□□□□ -1.8
NCK1-203ENST00000467911 TRPV6Q9H1D0 765 aa3.81□□□□□ -1.8
NCK1-203ENST00000467911 UPF3AQ9H1J1 476 aaKnown RBP3.81□□□□□ -1.8
NCK1-203ENST00000467911 WDR41Q9HAD4 459 aa3.81□□□□□ -1.8
NCK1-203ENST00000467911 SLC25A19Q9HC21 320 aa3.81□□□□□ -1.8
NCK1-203ENST00000467911 GDF3Q9NR23 364 aa3.81□□□□□ -1.8
NCK1-203ENST00000467911 COPS7AQ9UBW8 275 aa3.81□□□□□ -1.8
NCK1-203ENST00000467911 TEKT2Q9UIF3 430 aa3.81□□□□□ -1.8
NCK1-203ENST00000467911 IGHV4-30-2A0A087WSY4 118 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 LOC390937A0A1W2PQ73 354 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 YJEFN3A6XGL0 299 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 INPP4BO15327 924 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 IDH3BO43837 385 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 KIAA0513O60268 411 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 ANXA9O76027 345 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 PDGFBP01127 241 aaPredicted RBP3.8□□□□□ -1.8
NCK1-203ENST00000467911 FUT1P19526 365 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 UGT1A4P22310 534 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 MAT2AP31153 395 aaKnown RBP3.8□□□□□ -1.8
NCK1-203ENST00000467911 CRYBA2P53672 197 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 FASTKD3Q14CZ7 662 aaKnown RBP3.8□□□□□ -1.8
NCK1-203ENST00000467911 ZNF146Q15072 292 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 MTHFSDQ2M296 383 aaKnown RBP3.8□□□□□ -1.8
NCK1-203ENST00000467911 CMPK2Q5EBM0 449 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 Q6ZRG5 221 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 MCM10Q7L590 875 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 MIER3Q7Z3K6 550 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 CNNM3Q8NE01 707 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 OR6F1Q8NGZ6 308 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 COG3Q96JB2 828 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 RPGRIP1Q96KN7 1286 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 GFRA4Q9GZZ7 299 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 ZNF446Q9NWS9 450 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 TEX10Q9NXF1 929 aaPredicted RBP3.8□□□□□ -1.8
NCK1-203ENST00000467911 CNOT2Q9NZN8 540 aaKnown RBP3.8□□□□□ -1.8
NCK1-203ENST00000467911 NIP7Q9Y221 180 aaKnown RBP eCLIP3.8□□□□□ -1.8
NCK1-203ENST00000467911 PLEKHA6Q9Y2H5 1048 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 ATG4BQ9Y4P1 393 aa3.8□□□□□ -1.8
NCK1-203ENST00000467911 KLF2Q9Y5W3 355 aaPredicted RBP3.8□□□□□ -1.8
NCK1-203ENST00000467911 SALL1Q9NSC2 1324 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 RNF103-CHMP3A0A140T963 221 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.79□□□□□ -1.8
NCK1-203ENST00000467911 ARHGEF9O43307 516 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 HSF2BPO75031 334 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 STAM2O75886 525 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 SYNGR4O95473 234 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 MT-ATP6P00846 226 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 SERPINF2P08697 491 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 CCDC159P0C7I6 412 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 KRT5P13647 590 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 CYP11B1P15538 503 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 CD1DP15813 335 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 ZNF18P17022 549 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 FCGR2BP31994 310 aaPredicted RBP3.79□□□□□ -1.8
NCK1-203ENST00000467911 FCGR2CP31995 323 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 CAMLGP49069 296 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 ERVK-16P61578 105 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 RPS4XP62701 263 aaKnown RBP3.79□□□□□ -1.8
NCK1-203ENST00000467911 KLF5Q13887 457 aaPredicted RBP3.79□□□□□ -1.8
NCK1-203ENST00000467911 GCKRQ14397 625 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 ZKSCAN8Q15776 578 aaPredicted RBP3.79□□□□□ -1.8
NCK1-203ENST00000467911 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 LIPKQ5VXJ0 399 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 WDR25Q64LD2 544 aaPredicted RBP3.79□□□□□ -1.8
NCK1-203ENST00000467911 CDC42EP5Q6NZY7 148 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 TAF8Q7Z7C8 310 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 LRRTM1Q86UE6 522 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 METTL4Q8N3J2 472 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 OR4F5Q8NH21 305 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 GOLGA5Q8TBA6 731 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 ZNF599Q96NL3 588 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 RCHY1Q96PM5 261 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 FAM111AQ96PZ2 611 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 TNFRSF13CQ96RJ3 184 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 DCTN5Q9BTE1 182 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 C1orf21Q9H246 121 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 KCNK13Q9HB14 408 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 ZDHHC18Q9NUE0 388 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 SOHLH2Q9NX45 425 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 NUDT4Q9NZJ9 180 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 IL20RAQ9UHF4 553 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 ZNF346Q9UL40 294 aaKnown RBP3.79□□□□□ -1.8
NCK1-203ENST00000467911 CCPG1Q9ULG6 757 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 RNF215Q9Y6U7 377 aa3.79□□□□□ -1.8
NCK1-203ENST00000467911 UBE4BO95155 1302 aa3.78□□□□□ -1.8
NCK1-203ENST00000467911 KPNA7A9QM74 516 aa3.78□□□□□ -1.8
NCK1-203ENST00000467911 EEF2KO00418 725 aaKnown RBP3.78□□□□□ -1.8
NCK1-203ENST00000467911 FBP2O00757 339 aa3.78□□□□□ -1.8
NCK1-203ENST00000467911 SH2D1BO14796 132 aa3.78□□□□□ -1.8
NCK1-203ENST00000467911 TFECO14948 347 aaPredicted RBP3.78□□□□□ -1.8
NCK1-203ENST00000467911 FRAT2O75474 233 aaPredicted RBP3.78□□□□□ -1.8
NCK1-203ENST00000467911 MAPK3P27361 379 aaPredicted RBP3.78□□□□□ -1.8
NCK1-203ENST00000467911 PKLRP30613 574 aa3.78□□□□□ -1.8
NCK1-203ENST00000467911 ETV5P41161 510 aa3.78□□□□□ -1.8
NCK1-203ENST00000467911 NDUFV3P56181 108 aaKnown RBP3.78□□□□□ -1.8
NCK1-203ENST00000467911 PEX3P56589 373 aa3.78□□□□□ -1.8
NCK1-203ENST00000467911 KRTAP10-3P60369 221 aa3.78□□□□□ -1.8
NCK1-203ENST00000467911 FKBP3Q00688 224 aaKnown RBP3.78□□□□□ -1.8
NCK1-203ENST00000467911 PMP22Q01453 160 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms