RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 SLC10A1Q14973 349 aa19.44■□□□□ 0.7
COL9A3-207ENST00000467819 PRAMEF20Q5VT98 475 aa19.44■□□□□ 0.7
COL9A3-207ENST00000467819 GPR180Q86V85 440 aa19.44■□□□□ 0.7
COL9A3-207ENST00000467819 C7orf57Q8NEG2 295 aa19.44■□□□□ 0.7
COL9A3-207ENST00000467819 KCTD4Q8WVF5 259 aa19.44■□□□□ 0.7
COL9A3-207ENST00000467819 RBM18Q96H35 190 aaKnown RBP19.44■□□□□ 0.7
COL9A3-207ENST00000467819 ART5Q96L15 291 aa19.44■□□□□ 0.7
COL9A3-207ENST00000467819 MTERF1Q99551 399 aaKnown RBP19.44■□□□□ 0.7
COL9A3-207ENST00000467819 ZNF559Q9BR84 538 aa19.44■□□□□ 0.7
COL9A3-207ENST00000467819 CENPKQ9BS16 269 aa19.44■□□□□ 0.7
COL9A3-207ENST00000467819 TTYH2Q9BSA4 534 aa19.44■□□□□ 0.7
COL9A3-207ENST00000467819 DMRT3Q9NQL9 472 aa19.44■□□□□ 0.7
COL9A3-207ENST00000467819 MS4A12Q9NXJ0 267 aa19.44■□□□□ 0.7
COL9A3-207ENST00000467819 PHF11Q9UIL8 331 aa19.44■□□□□ 0.7
COL9A3-207ENST00000467819 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.44■□□□□ 0.7
COL9A3-207ENST00000467819 A0A1B0GVC2 190 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 NADKO95544 446 aaPredicted RBP19.43■□□□□ 0.7
COL9A3-207ENST00000467819 GLI4P10075 376 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 ALOX15P16050 662 aaPredicted RBP19.43■□□□□ 0.7
COL9A3-207ENST00000467819 STX2P32856 288 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 MAGEA4P43358 317 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 HERVK_113P63132 956 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 ERVK-8P63133 956 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 IRF9Q00978 393 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 PCDH1Q08174 1060 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 HYAL4Q2M3T9 481 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 ZNF791Q3KP31 576 aaPredicted RBP19.43■□□□□ 0.7
COL9A3-207ENST00000467819 SLC22A10Q63ZE4 541 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 RTL6Q6ICC9 239 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 FBXO25Q8TCJ0 367 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 TANKQ92844 425 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 FBXL20Q96IG2 436 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 GAL3ST4Q96RP7 486 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 ERVK-6Q9BXR3 956 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 ALKBH4Q9NXW9 302 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 ADGRE2Q9UHX3 823 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 ERVK-19Q9WJR5 959 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 UTP11Q9Y3A2 253 aaKnown RBP19.43■□□□□ 0.7
COL9A3-207ENST00000467819 MTORP42345 2549 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 EXPH5Q8NEV8 1989 aa19.43■□□□□ 0.7
COL9A3-207ENST00000467819 TRGV5A0A0B4J1U4 118 aa19.42■□□□□ 0.7
COL9A3-207ENST00000467819 SUSD5O60279 629 aa19.42■□□□□ 0.7
COL9A3-207ENST00000467819 HOXD4P09016 255 aaPredicted RBP19.42■□□□□ 0.7
COL9A3-207ENST00000467819 MTHFD2P13995 350 aa19.42■□□□□ 0.7
COL9A3-207ENST00000467819 TLX1P31314 330 aaPredicted RBP19.42■□□□□ 0.7
COL9A3-207ENST00000467819 BUD31P41223 144 aaPredicted RBP19.42■□□□□ 0.7
COL9A3-207ENST00000467819 RPS13P62277 151 aaKnown RBP19.42■□□□□ 0.7
COL9A3-207ENST00000467819 KCNJ2P63252 427 aa19.42■□□□□ 0.7
COL9A3-207ENST00000467819 MYBPHQ13203 477 aa19.42■□□□□ 0.7
COL9A3-207ENST00000467819 ZNF267Q14586 743 aaPredicted RBP19.42■□□□□ 0.7
COL9A3-207ENST00000467819 C1orf185Q5T7R7 199 aa19.42■□□□□ 0.7
COL9A3-207ENST00000467819 WLSQ5T9L3 541 aa19.42■□□□□ 0.7
COL9A3-207ENST00000467819 ADGRD1Q6QNK2 874 aa19.42■□□□□ 0.7
COL9A3-207ENST00000467819 LYPD8Q6UX82 237 aa19.42■□□□□ 0.7
COL9A3-207ENST00000467819 TMEM200AQ86VY9 491 aa19.42■□□□□ 0.7
COL9A3-207ENST00000467819 CENPLQ8N0S6 344 aaPredicted RBP19.42■□□□□ 0.7
COL9A3-207ENST00000467819 FAM13CQ8NE31 585 aa19.42■□□□□ 0.7
COL9A3-207ENST00000467819 SARAFQ96BY9 339 aa19.42■□□□□ 0.7
COL9A3-207ENST00000467819 MRRFQ96E11 262 aaKnown RBP19.42■□□□□ 0.7
COL9A3-207ENST00000467819 SPACA9Q96E40 222 aaPredicted RBP19.42■□□□□ 0.7
COL9A3-207ENST00000467819 ACTR8Q9H981 624 aa19.42■□□□□ 0.7
COL9A3-207ENST00000467819 SH2D2AQ9NP31 389 aa19.42■□□□□ 0.7
COL9A3-207ENST00000467819 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.42■□□□□ 0.77e-8■□□□□ 10.3
COL9A3-207ENST00000467819 ACOT9Q9Y305 439 aa19.42■□□□□ 0.7
COL9A3-207ENST00000467819 AKAP6Q13023 2319 aa19.42■□□□□ 0.7
COL9A3-207ENST00000467819 A0A0G2JNJ9 132 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 IQANK1A0A1B0GTG1 560 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 LRRC14BA6NHZ5 514 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 GLOD5A6NK44 160 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 WASHC1A8K0Z3 465 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 SYCE1LA8MT33 242 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 KLK8O60259 260 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 OR10H2O60403 315 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 LRATO95237 230 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 GFAPP14136 432 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 ENDOUP21128 410 aaKnown RBP19.41■□□□□ 0.7
COL9A3-207ENST00000467819 PIK3CBP42338 1070 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 ZFP36L2P47974 494 aaKnown RBP19.41■□□□□ 0.7
COL9A3-207ENST00000467819 BIKQ13323 160 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 NAB1Q13506 487 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 SETDB1Q15047 1291 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 TRADDQ15628 312 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 PFKFB4Q16877 469 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 RNF111Q6ZNA4 994 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 SLC29A4Q7RTT9 530 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 ST13P4Q8IZP2 240 aaPredicted RBP19.41■□□□□ 0.7
COL9A3-207ENST00000467819 ZCCHC7Q8N3Z6 543 aaKnown RBP19.41■□□□□ 0.7
COL9A3-207ENST00000467819 PAQR8Q8TEZ7 354 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 ZNF703Q9H7S9 590 aaPredicted RBP19.41■□□□□ 0.7
COL9A3-207ENST00000467819 SPRR3Q9UBC9 169 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 Q9UFV3 132 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 KCNN3Q9UGI6 736 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 BOKQ9UMX3 212 aaPredicted RBP19.41■□□□□ 0.7
COL9A3-207ENST00000467819 PCDHGA11Q9Y5H2 935 aa19.41■□□□□ 0.7
COL9A3-207ENST00000467819 HCN1O60741 890 aa19.4■□□□□ 0.7
COL9A3-207ENST00000467819 WDR1O75083 606 aa19.4■□□□□ 0.7
COL9A3-207ENST00000467819 EEDO75530 441 aaKnown RBP19.4■□□□□ 0.7
COL9A3-207ENST00000467819 RFPL3SP0C7P2 107 aa19.4■□□□□ 0.7
COL9A3-207ENST00000467819 ADH7P40394 386 aa19.4■□□□□ 0.7
COL9A3-207ENST00000467819 PHEXP78562 749 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms