RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 COPG1Q9Y678 874 aaKnown RBP14.24□□□□□ -0.13
NPHP4-205ENST00000466897 ZNF780BQ9Y6R6 833 aa14.24□□□□□ -0.13
NPHP4-205ENST00000466897 PCSK5Q92824 1860 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 GABRR3A8MPY1 467 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 SOCS6O14544 535 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 SLC22A3O75751 556 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 SLITRK5O94991 958 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 LRATO95237 230 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 ATP1B1P05026 303 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 IFI6P09912 130 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 CPMP14384 443 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 COX7A2P14406 83 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 GPX3P22352 226 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 ADSLP30566 484 aaPredicted RBP14.23□□□□□ -0.13
NPHP4-205ENST00000466897 STT3AP46977 705 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 FOXL2P58012 376 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 SRSF11Q05519 484 aaKnown RBP14.23□□□□□ -0.13
NPHP4-205ENST00000466897 ELAVL1Q15717 326 aaKnown RBP14.23□□□□□ -0.13
NPHP4-205ENST00000466897 FAM69BQ5VUD6 431 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 RIPOR1Q6ZS17 1223 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 TMEM151BQ8IW70 566 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 THAP4Q8WY91 577 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 TSLPQ969D9 159 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 NAF1Q96HR8 494 aaKnown RBP14.23□□□□□ -0.13
NPHP4-205ENST00000466897 CATSPER2Q96P56 530 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 ALOXE3Q9BYJ1 711 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 BHLHE41Q9C0J9 482 aaPredicted RBP14.23□□□□□ -0.13
NPHP4-205ENST00000466897 ACSS1Q9NUB1 689 aaPredicted RBP14.23□□□□□ -0.13
NPHP4-205ENST00000466897 ENTPD4Q9Y227 616 aa14.23□□□□□ -0.13
NPHP4-205ENST00000466897 OR2W5A6NFC9 320 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 WASHC1A8K0Z3 465 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 MYO1GB0I1T2 1018 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 SLC22A2O15244 555 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 AKAP10O43572 662 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 ERAL1O75616 437 aaKnown RBP14.22□□□□□ -0.13
NPHP4-205ENST00000466897 PORP16435 677 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-205ENST00000466897 NTSP30990 170 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 XKP51811 444 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 UFM1P61960 85 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 TLE3Q04726 772 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 MLC1Q15049 377 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 SPRED3Q2MJR0 410 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 CPTPQ5TA50 214 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 GKAP1Q5VSY0 366 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-205ENST00000466897 BROXQ5VW32 411 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 KIRREL2Q6UWL6 708 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 LRRC69Q6ZNQ3 347 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 CPEB2Q7Z5Q1 589 aaKnown RBP14.22□□□□□ -0.13
NPHP4-205ENST00000466897 MRGPREQ86SM8 312 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 LRRC25Q8N386 305 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-205ENST00000466897 KRTCAP2Q8N6L1 136 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 ANKS4BQ8N8V4 417 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 GFM2Q969S9 779 aaKnown RBP14.22□□□□□ -0.13
NPHP4-205ENST00000466897 EXOSC8Q96B26 276 aaKnown RBP14.22□□□□□ -0.13
NPHP4-205ENST00000466897 MARK4Q96L34 752 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 TEX37Q96LM6 180 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 ZBTB18Q99592 522 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 ZNF700Q9H0M5 742 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 C5AR2Q9P296 337 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 PPIEQ9UNP9 301 aaKnown RBP14.22□□□□□ -0.13
NPHP4-205ENST00000466897 ARL2BPQ9Y2Y0 163 aa14.22□□□□□ -0.13
NPHP4-205ENST00000466897 URB1O60287 2271 aaKnown RBP14.21□□□□□ -0.13
NPHP4-205ENST00000466897 DMXL2Q8TDJ6 3036 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 IGHV1-45A0A0A0MS14 117 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 DYTNA2CJ06 578 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 FAM234BA2RU67 622 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 SAGE2PA6NJ88 616 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 TAF4O00268 1085 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 PDPK1O15530 556 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 EFSO43281 561 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 CCDC22O60826 627 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 IL6P05231 212 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 COX6A1P12074 109 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 WT1P19544 449 aaPredicted RBP14.21□□□□□ -0.13
NPHP4-205ENST00000466897 NCF2P19878 526 aaPredicted RBP14.21□□□□□ -0.13
NPHP4-205ENST00000466897 IL12AP29459 219 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 OTX2P32243 289 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 MPIP34949 423 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 KIR3DL1P43629 444 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 ZFP36L2P47974 494 aaKnown RBP14.21□□□□□ -0.13
NPHP4-205ENST00000466897 OR4D2P58180 307 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 LRRC74AQ0VAA2 488 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 CDC20Q12834 499 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 SRSF6Q13247 344 aaKnown RBP14.21□□□□□ -0.13
NPHP4-205ENST00000466897 RCAN2Q14206 197 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 PCOLCEQ15113 449 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 MPEG1Q2M385 716 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 ZNF385BQ569K4 471 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 MSANTD1Q6ZTZ1 278 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 LANCL3Q6ZV70 420 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 OR4N5Q8IXE1 308 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 ZSCAN1Q8NBB4 408 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 OR7A2PQ8NGA2 310 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 OR11G2Q8NGC1 345 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 OR14A16Q8NHC5 309 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 SUN3Q8TAQ9 357 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 ZNF675Q8TD23 568 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 TSPEARQ8WU66 669 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 ERP27Q96DN0 273 aa14.21□□□□□ -0.13
NPHP4-205ENST00000466897 ZBED6CLQ96FA7 236 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms