RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 CLCA3PQ9Y6N3 262 aa10.88□□□□□ -0.67
CUX1-207ENST00000465461 CHD6Q8TD26 2715 aa10.88□□□□□ -0.67
CUX1-207ENST00000465461 BLACEA4D250 179 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 TMEM114B3SHH9 223 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 RGS14O43566 566 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 RSL1D1O76021 490 aaKnown RBP10.87□□□□□ -0.67
CUX1-207ENST00000465461 DDAH2O95865 285 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 WDPCPO95876 746 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 CHEK2O96017 543 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 ALPPP05187 535 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 ANXA4P09525 319 aaPredicted RBP10.87□□□□□ -0.67
CUX1-207ENST00000465461 ALOX15P16050 662 aaPredicted RBP10.87□□□□□ -0.67
CUX1-207ENST00000465461 TACR1P25103 407 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 PIK3R1P27986 724 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 SERPINB5P36952 375 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 XKP51811 444 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 C2orf80Q0P641 193 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 C19orf57Q0VDD7 668 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 MFAP5Q13361 173 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 SERTAD2Q14140 314 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 NR6A1Q15406 480 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 PDCD2Q16342 344 aaPredicted RBP10.87□□□□□ -0.67
CUX1-207ENST00000465461 PLEKHN1Q494U1 663 aaPredicted RBP10.87□□□□□ -0.67
CUX1-207ENST00000465461 RFTN2Q52LD8 501 aaPredicted RBP10.87□□□□□ -0.67
CUX1-207ENST00000465461 SLC6A19Q695T7 634 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 OR52E8Q6IFG1 317 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 NOXRED1Q6NXP6 359 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 H3F3CQ6NXT2 135 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 JMJD6Q6NYC1 403 aaPredicted RBP10.87□□□□□ -0.67
CUX1-207ENST00000465461 SLC48A1Q6P1K1 146 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 BEST3Q8N1M1 668 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 ZADH2Q8N4Q0 377 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 OR4K14Q8NGD5 310 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 SLC2A12Q8TD20 617 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 GFM2Q969S9 779 aaKnown RBP10.87□□□□□ -0.67
CUX1-207ENST00000465461 RBM18Q96H35 190 aaKnown RBP10.87□□□□□ -0.67
CUX1-207ENST00000465461 EGLN2Q96KS0 407 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 CNPPD1Q9BV87 410 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 VIPAS39Q9H9C1 493 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 BAIAP2L1Q9UHR4 511 aa10.87□□□□□ -0.67
CUX1-207ENST00000465461 C1orf226A1L170 272 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 LSM1O15116 133 aaKnown RBP10.86□□□□□ -0.67
CUX1-207ENST00000465461 SUV39H1O43463 412 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 OR10H2O60403 315 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 DPM1O60762 260 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 PEX11AO75192 247 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 GUCY1B2O75343 617 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 CT62P0C5K7 136 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 NT5EP21589 574 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 CLCN2P51788 898 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 MLLT10P55197 1068 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 TRA2BP62995 288 aaKnown RBP10.86□□□□□ -0.67
CUX1-207ENST00000465461 ERVK-8P63133 956 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 RPL38P63173 70 aaKnown RBP10.86□□□□□ -0.67
CUX1-207ENST00000465461 ARG2P78540 354 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 SRSF11Q05519 484 aaKnown RBP10.86□□□□□ -0.67
CUX1-207ENST00000465461 ZNF267Q14586 743 aaPredicted RBP10.86□□□□□ -0.67
CUX1-207ENST00000465461 LTB4RQ15722 352 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 PRR30Q53SZ7 412 aaPredicted RBP10.86□□□□□ -0.67
CUX1-207ENST00000465461 ACER2Q5QJU3 275 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 ZNF468Q5VIY5 522 aaPredicted RBP10.86□□□□□ -0.67
CUX1-207ENST00000465461 ABHD17BQ5VST6 288 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 GALNT18Q6P9A2 607 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 IGFL2Q6UWQ7 119 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 TMEM132CQ8N3T6 1108 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 GOLGA6L1Q8N7Z2 621 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 Q8NA96 180 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 CLHC1Q8NHS4 586 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 ZNF721Q8TF20 911 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 EXOSC8Q96B26 276 aaKnown RBP10.86□□□□□ -0.67
CUX1-207ENST00000465461 KLHL29Q96CT2 875 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 CNRIP1Q96F85 164 aaPredicted RBP10.86□□□□□ -0.67
CUX1-207ENST00000465461 VMP1Q96GC9 406 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 SENP5Q96HI0 755 aaPredicted RBP10.86□□□□□ -0.67
CUX1-207ENST00000465461 LMF1Q96S06 567 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 FAIM2Q9BWQ8 316 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 DEFB126Q9BYW3 111 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 TRIM4Q9C037 500 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 EPS8L2Q9H6S3 715 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 C1orf109Q9NX04 203 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 SIRT5Q9NXA8 310 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 UTS2RQ9UKP6 389 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 EXO1Q9UQ84 846 aaKnown RBP10.86□□□□□ -0.67
CUX1-207ENST00000465461 ERVK-19Q9WJR5 959 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 RAP2CQ9Y3L5 183 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 PCDHGB7Q9Y5F8 929 aa10.86□□□□□ -0.67
CUX1-207ENST00000465461 HEMK1Q9Y5R4 338 aaPredicted RBP10.86□□□□□ -0.67
CUX1-207ENST00000465461 SLC28A2O43868 658 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 LRATO95237 230 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 SLC35E2P0CK97 266 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 KITP10721 976 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 CPMP14384 443 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 PRPH2P23942 346 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 GRK2P25098 689 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 RPL14P50914 215 aaKnown RBP10.85□□□□□ -0.67
CUX1-207ENST00000465461 SLC18A1P54219 525 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 PLIN5Q00G26 463 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 ZNF763Q0D2J5 394 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 TERF2Q15554 542 aa10.85□□□□□ -0.67
CUX1-207ENST00000465461 MEP1AQ16819 746 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms