RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 A0A1W2PPB8 328 aa23.95■■□□□ 1.42
U2AF1-206ENST00000464750 A0A1W2PRS3 328 aa23.95■■□□□ 1.42
U2AF1-206ENST00000464750 PINLYPA6NC86 204 aa23.95■■□□□ 1.42
U2AF1-206ENST00000464750 GLOD5A6NK44 160 aa23.95■■□□□ 1.42
U2AF1-206ENST00000464750 KIR3DP1A8MWS1 328 aa23.95■■□□□ 1.42
U2AF1-206ENST00000464750 HRKO00198 91 aa23.95■■□□□ 1.42
U2AF1-206ENST00000464750 PRRG2O14669 202 aa23.95■■□□□ 1.42
U2AF1-206ENST00000464750 HNRNPRO43390 633 aaKnown RBP23.95■■□□□ 1.42
U2AF1-206ENST00000464750 GBAP04062 536 aa23.95■■□□□ 1.42
U2AF1-206ENST00000464750 GRNP28799 593 aaKnown RBP23.95■■□□□ 1.42
U2AF1-206ENST00000464750 SMSP52788 366 aa23.95■■□□□ 1.42
U2AF1-206ENST00000464750 ZNF750Q32MQ0 723 aa23.95■■□□□ 1.42
U2AF1-206ENST00000464750 GGTA1PQ4G0N0 100 aa23.95■■□□□ 1.42
U2AF1-206ENST00000464750 SP5Q6BEB4 398 aaPredicted RBP23.95■■□□□ 1.42
U2AF1-206ENST00000464750 RPS27LQ71UM5 84 aaKnown RBP23.95■■□□□ 1.42
U2AF1-206ENST00000464750 IFT20Q8IY31 132 aa23.95■■□□□ 1.42
U2AF1-206ENST00000464750 OR2M7Q8NG81 312 aa23.95■■□□□ 1.42
U2AF1-206ENST00000464750 NUBPLQ8TB37 319 aa23.95■■□□□ 1.42
U2AF1-206ENST00000464750 DOK4Q8TEW6 326 aa23.95■■□□□ 1.42
U2AF1-206ENST00000464750 MARVELD3Q96A59 401 aa23.95■■□□□ 1.42
U2AF1-206ENST00000464750 FBXL20Q96IG2 436 aa23.95■■□□□ 1.42
U2AF1-206ENST00000464750 PHF12Q96QT6 1004 aa23.95■■□□□ 1.42
U2AF1-206ENST00000464750 CNPPD1Q9BV87 410 aa23.95■■□□□ 1.42
U2AF1-206ENST00000464750 A0A1B0GTH9 108 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 WASHC1A8K0Z3 465 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 A8MT66 165 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 G3V3Y1 287 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 OR10H2O60403 315 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 GPR75O95800 540 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 SBK3P0C264 359 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 GCAP28676 217 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 HERVK_113P63132 956 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 ERVK-8P63133 956 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 PLGLB1Q02325 96 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 ASPHQ12797 758 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 IFT88Q13099 833 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 XKRXQ6PP77 449 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 OPN5Q6U736 354 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 NCCRP1Q6ZVX7 275 aaPredicted RBP23.94■■□□□ 1.42
U2AF1-206ENST00000464750 MILR1Q7Z6M3 343 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 DOLPP1Q86YN1 238 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 OR4F6Q8NGB9 312 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 ZNF483Q8TF39 744 aaPredicted RBP23.94■■□□□ 1.42
U2AF1-206ENST00000464750 ERVK-6Q9BXR3 956 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 ERVK-19Q9WJR5 959 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 DNAJC13O75165 2243 aa23.94■■□□□ 1.42
U2AF1-206ENST00000464750 PTGS2P35354 604 aa23.93■■□□□ 1.42
U2AF1-206ENST00000464750 MPEG1Q2M385 716 aa23.93■■□□□ 1.42
U2AF1-206ENST00000464750 SPRED3Q2MJR0 410 aa23.93■■□□□ 1.42
U2AF1-206ENST00000464750 C10orf62Q5T681 223 aaPredicted RBP23.93■■□□□ 1.42
U2AF1-206ENST00000464750 LGSNQ5TDP6 509 aa23.93■■□□□ 1.42
U2AF1-206ENST00000464750 OR52E8Q6IFG1 317 aa23.93■■□□□ 1.42
U2AF1-206ENST00000464750 C3P1Q6ZMU1 363 aa23.93■■□□□ 1.42
U2AF1-206ENST00000464750 TRMT10CQ7L0Y3 403 aaKnown RBP23.93■■□□□ 1.42
U2AF1-206ENST00000464750 GOLM1Q8NBJ4 401 aa23.93■■□□□ 1.42
U2AF1-206ENST00000464750 OR52N2Q8NGI0 321 aa23.93■■□□□ 1.42
U2AF1-206ENST00000464750 UCN3Q969E3 161 aa23.93■■□□□ 1.42
U2AF1-206ENST00000464750 ELOVL6Q9H5J4 265 aa23.93■■□□□ 1.42
U2AF1-206ENST00000464750 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.93■■□□□ 1.42
U2AF1-206ENST00000464750 TEX10Q9NXF1 929 aaPredicted RBP23.93■■□□□ 1.42
U2AF1-206ENST00000464750 A0A1B0GTL3 188 aa23.92■■□□□ 1.42
U2AF1-206ENST00000464750 FAM166BA8MTA8 275 aa23.92■■□□□ 1.42
U2AF1-206ENST00000464750 ACOT7O00154 380 aa23.92■■□□□ 1.42
U2AF1-206ENST00000464750 RIPK2O43353 540 aa23.92■■□□□ 1.42
U2AF1-206ENST00000464750 OTCP00480 354 aa23.92■■□□□ 1.42
U2AF1-206ENST00000464750 AGAP20933 346 aa23.92■■□□□ 1.42
U2AF1-206ENST00000464750 HTR1EP28566 365 aa23.92■■□□□ 1.42
U2AF1-206ENST00000464750 CDH13P55290 713 aa23.92■■□□□ 1.42
U2AF1-206ENST00000464750 SGO1Q5FBB7 561 aa23.92■■□□□ 1.42
U2AF1-206ENST00000464750 PIGGQ5H8A4 983 aa23.92■■□□□ 1.42
U2AF1-206ENST00000464750 GK5Q6ZS86 529 aa23.92■■□□□ 1.42
U2AF1-206ENST00000464750 CD163Q86VB7 1156 aa23.92■■□□□ 1.42
U2AF1-206ENST00000464750 TMEM151AQ8N4L1 468 aa23.92■■□□□ 1.42
U2AF1-206ENST00000464750 FAM57AQ8TBR7 257 aa23.92■■□□□ 1.42
U2AF1-206ENST00000464750 SLC22A8Q8TCC7 542 aa23.92■■□□□ 1.42
U2AF1-206ENST00000464750 MTBPQ96DY7 904 aa23.92■■□□□ 1.42
U2AF1-206ENST00000464750 SGCZQ96LD1 299 aa23.92■■□□□ 1.42
U2AF1-206ENST00000464750 GAL3ST4Q96RP7 486 aa23.92■■□□□ 1.42
U2AF1-206ENST00000464750 MRPL1Q9BYD6 325 aaKnown RBP23.92■■□□□ 1.42
U2AF1-206ENST00000464750 PLSCR2Q9NRY7 297 aa23.92■■□□□ 1.42
U2AF1-206ENST00000464750 E9PLN8 166 aa23.91■■□□□ 1.42
U2AF1-206ENST00000464750 TPOP07202 933 aa23.91■■□□□ 1.42
U2AF1-206ENST00000464750 TSPAN8P19075 237 aa23.91■■□□□ 1.42
U2AF1-206ENST00000464750 PPIAP62937 165 aaKnown RBP23.91■■□□□ 1.42
U2AF1-206ENST00000464750 ZNF267Q14586 743 aaPredicted RBP23.91■■□□□ 1.42
U2AF1-206ENST00000464750 TEX35Q5T0J7 233 aa23.91■■□□□ 1.42
U2AF1-206ENST00000464750 LETMD1Q6P1Q0 360 aa23.91■■□□□ 1.42
U2AF1-206ENST00000464750 ADGRD1Q6QNK2 874 aa23.91■■□□□ 1.42
U2AF1-206ENST00000464750 RNF111Q6ZNA4 994 aa23.91■■□□□ 1.42
U2AF1-206ENST00000464750 TIFABQ6ZNK6 161 aa23.91■■□□□ 1.42
U2AF1-206ENST00000464750 EID3Q8N140 333 aa23.91■■□□□ 1.42
U2AF1-206ENST00000464750 PHF10Q8WUB8 498 aaKnown RBP23.91■■□□□ 1.42
U2AF1-206ENST00000464750 RIT1Q92963 219 aa23.91■■□□□ 1.42
U2AF1-206ENST00000464750 VKORC1Q9BQB6 163 aa23.91■■□□□ 1.42
U2AF1-206ENST00000464750 FAM173AQ9BQD7 235 aa23.91■■□□□ 1.42
U2AF1-206ENST00000464750 C1QTNF3Q9BXJ4 246 aa23.91■■□□□ 1.42
U2AF1-206ENST00000464750 TTTY12Q9BZ98 90 aa23.91■■□□□ 1.42
U2AF1-206ENST00000464750 DEFB127Q9H1M4 99 aa23.91■■□□□ 1.42
U2AF1-206ENST00000464750 SACM1LQ9NTJ5 587 aa23.91■■□□□ 1.42
U2AF1-206ENST00000464750 AHSPQ9NZD4 102 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms