RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 SYNDIG1LA6NDD5 238 aa12.04□□□□□ -0.48
XRN1-203ENST00000463916 CYSRT1A8MQ03 144 aa12.04□□□□□ -0.48
XRN1-203ENST00000463916 NME2P1O60361 137 aa12.04□□□□□ -0.48
XRN1-203ENST00000463916 MLYCDO95822 493 aa12.04□□□□□ -0.48
XRN1-203ENST00000463916 ALOX15P16050 662 aaPredicted RBP12.04□□□□□ -0.48
XRN1-203ENST00000463916 NME2P22392 152 aa12.04□□□□□ -0.48
XRN1-203ENST00000463916 HK2P52789 917 aa12.04□□□□□ -0.48
XRN1-203ENST00000463916 ZNF750Q32MQ0 723 aa12.04□□□□□ -0.48
XRN1-203ENST00000463916 SCIMPQ6UWF3 145 aa12.04□□□□□ -0.48
XRN1-203ENST00000463916 ST13P4Q8IZP2 240 aaPredicted RBP12.04□□□□□ -0.48
XRN1-203ENST00000463916 TMEM156Q8N614 296 aa12.04□□□□□ -0.48
XRN1-203ENST00000463916 CPSF7Q8N684 471 aaKnown RBP12.04□□□□□ -0.48
XRN1-203ENST00000463916 HORMAD2Q8N7B1 307 aa12.04□□□□□ -0.48
XRN1-203ENST00000463916 DNAJB8Q8NHS0 232 aa12.04□□□□□ -0.48
XRN1-203ENST00000463916 AGAP11Q8TF27 550 aa12.04□□□□□ -0.48
XRN1-203ENST00000463916 C5orf34Q96MH7 638 aa12.04□□□□□ -0.48
XRN1-203ENST00000463916 FRMD6Q96NE9 622 aa12.04□□□□□ -0.48
XRN1-203ENST00000463916 RASL10BQ96S79 203 aa12.04□□□□□ -0.48
XRN1-203ENST00000463916 TSPAN10Q9H1Z9 355 aaPredicted RBP12.04□□□□□ -0.48
XRN1-203ENST00000463916 AHSPQ9NZD4 102 aa12.04□□□□□ -0.48
XRN1-203ENST00000463916 ADAM29Q9UKF5 820 aa12.04□□□□□ -0.48
XRN1-203ENST00000463916 YARS2Q9Y2Z4 477 aaKnown RBP12.04□□□□□ -0.48
XRN1-203ENST00000463916 CRYBG3Q68DQ2 2970 aa12.03□□□□□ -0.48
XRN1-203ENST00000463916 ICE1Q9Y2F5 2266 aa12.03□□□□□ -0.48
XRN1-203ENST00000463916 COPEO14579 308 aa12.03□□□□□ -0.48
XRN1-203ENST00000463916 ULK1O75385 1050 aa12.03□□□□□ -0.48
XRN1-203ENST00000463916 OR6B1O95007 311 aa12.03□□□□□ -0.48
XRN1-203ENST00000463916 ESRRBO95718 433 aa12.03□□□□□ -0.48
XRN1-203ENST00000463916 CRYABP02511 175 aaKnown RBP12.03□□□□□ -0.48
XRN1-203ENST00000463916 PLIN5Q00G26 463 aa12.03□□□□□ -0.48
XRN1-203ENST00000463916 CCDC153Q494R4 210 aa12.03□□□□□ -0.48
XRN1-203ENST00000463916 C9orf40Q8IXQ3 194 aa12.03□□□□□ -0.48
XRN1-203ENST00000463916 CNPY4Q8N129 248 aa12.03□□□□□ -0.48
XRN1-203ENST00000463916 C1orf52Q8N6N3 182 aaKnown RBP12.03□□□□□ -0.48
XRN1-203ENST00000463916 TMEM178AQ8NBL3 297 aa12.03□□□□□ -0.48
XRN1-203ENST00000463916 CHTF18Q8WVB6 975 aa12.03□□□□□ -0.48
XRN1-203ENST00000463916 TM4SF18Q96CE8 201 aa12.03□□□□□ -0.48
XRN1-203ENST00000463916 ACPTQ9BZG2 426 aa12.03□□□□□ -0.48
XRN1-203ENST00000463916 MID1IP1Q9NPA3 183 aa12.03□□□□□ -0.48
XRN1-203ENST00000463916 OXSMQ9NWU1 459 aa12.03□□□□□ -0.48
XRN1-203ENST00000463916 VPS29Q9UBQ0 182 aa12.03□□□□□ -0.48
XRN1-203ENST00000463916 SPTBN1Q01082 2364 aaKnown RBP12.03□□□□□ -0.48
XRN1-203ENST00000463916 DOPEY1Q5JWR5 2465 aa12.03□□□□□ -0.48
XRN1-203ENST00000463916 WIPF3A6NGB9 483 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 CDK2AP1O14519 115 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 UNC5CO95185 931 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 KRT6AP02538 564 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 KRT6BP04259 564 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 COX7A2P14406 83 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 CPA3P15088 417 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 SOX3P41225 446 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 KRT6CP48668 564 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 SSR4P51571 173 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 MAPK12P53778 367 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 PKNOX1P55347 436 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 HMGCS1Q01581 520 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 PAGE2Q7Z2X7 111 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 TRABD2AQ86V40 505 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 SULF2Q8IWU5 870 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 CYP4Z2PQ8N1L4 340 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 OR8K3Q8NH51 312 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 SSC4DQ8WTU2 575 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 RIT1Q92963 219 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 CAVIN3Q969G5 261 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 CCDC126Q96EE4 140 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 FBXL20Q96IG2 436 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 PARD6BQ9BYG5 372 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 WDR41Q9HAD4 459 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 CES1P1Q9UKY3 287 aa12.02□□□□□ -0.48
XRN1-203ENST00000463916 ZNHIT1O43257 154 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 OR10H2O60403 315 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 LDLRP01130 860 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 CLPSP04118 112 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 SLC35E2P0CK97 266 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 SERPINB3P29508 390 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 HMOX2P30519 316 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 RFC3P40938 356 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 DNAJB13P59910 316 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 ERVK-8P63133 956 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 RAE1P78406 368 aaKnown RBP12.02□□□□□ -0.49
XRN1-203ENST00000463916 BIKQ13323 160 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 ZNF267Q14586 743 aaPredicted RBP12.02□□□□□ -0.49
XRN1-203ENST00000463916 OR52E8Q6IFG1 317 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 FAM180BQ6P0A1 224 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 EMBQ6PCB8 327 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 IL20RBQ6UXL0 311 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 GFRALQ6UXV0 394 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 FRMD7Q6ZUT3 714 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 C10orf107Q8IVU9 208 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 APIPQ96GX9 242 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 CNPPD1Q9BV87 410 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 SHCBP1LQ9BZQ2 653 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 DEPPQ9NTK1 212 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 COPS7AQ9UBW8 275 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 SEC14L3Q9UDX4 400 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 ERVK-19Q9WJR5 959 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 SLC5A6Q9Y289 635 aa12.02□□□□□ -0.49
XRN1-203ENST00000463916 LRRTM2O43300 516 aa12.01□□□□□ -0.49
XRN1-203ENST00000463916 CT62P0C5K7 136 aa12.01□□□□□ -0.49
XRN1-203ENST00000463916 CREB1P16220 341 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms