RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 KCNC2Q96PR1 638 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 F2RL3Q96RI0 385 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 MAPKAP1Q9BPZ7 522 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 WDR83Q9BRX9 315 aaKnown RBP13.27□□□□□ -0.29
SMC1A-204ENST00000463684 CALHM2Q9HA72 323 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 PPANQ9NQ55 473 aaKnown RBP13.27□□□□□ -0.29
SMC1A-204ENST00000463684 PRDM7Q9NQW5 492 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 NDRG3Q9UGV2 375 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 IKZF3Q9UKT9 509 aa13.27□□□□□ -0.29
SMC1A-204ENST00000463684 CNOT11Q9UKZ1 510 aaKnown RBP13.27□□□□□ -0.29
SMC1A-204ENST00000463684 CORO1CQ9ULV4 474 aaPredicted RBP13.27□□□□□ -0.29
SMC1A-204ENST00000463684 FN1P02751 2386 aaKnown RBP13.27□□□□□ -0.29
SMC1A-204ENST00000463684 IQANK1A0A1B0GTG1 560 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 ANKRD33BA6NCL7 494 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 CDC7O00311 574 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 CLGNO14967 610 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 TRIM3O75382 744 aaPredicted RBP13.26□□□□□ -0.29
SMC1A-204ENST00000463684 LRATO95237 230 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 TMIGD3P0DMS9 266 aaPredicted RBP13.26□□□□□ -0.29
SMC1A-204ENST00000463684 CPN2P22792 545 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 STT3AP46977 705 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 CPA2P48052 419 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 RCAN2Q14206 197 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 TOMM20Q15388 145 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 JMJD1CQ15652 2540 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 SPANXN3Q5MJ09 141 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 YTHDF3Q7Z739 585 aaKnown RBP13.26□□□□□ -0.29
SMC1A-204ENST00000463684 OR4N5Q8IXE1 308 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 NKAPQ8N5F7 415 aaKnown RBP13.26□□□□□ -0.29
SMC1A-204ENST00000463684 NAT8LQ8N9F0 302 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 ANKRD7Q92527 254 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 DIO2Q92813 273 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 MAGOHBQ96A72 148 aaKnown RBP13.26□□□□□ -0.29
SMC1A-204ENST00000463684 PPWD1Q96BP3 646 aaKnown RBP13.26□□□□□ -0.29
SMC1A-204ENST00000463684 GAL3ST4Q96RP7 486 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 TBCDQ9BTW9 1192 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 GPRC5BQ9NZH0 403 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 SLC6A5Q9Y345 797 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 OARD1Q9Y530 152 aa13.26□□□□□ -0.29
SMC1A-204ENST00000463684 A0A1W2PPR1 153 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 NPEPPSL1A6NEC2 478 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 CAPN14A8MX76 684 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 TP53I11O14683 189 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 SNX4O95219 450 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 TBX6O95947 436 aaPredicted RBP13.25□□□□□ -0.29
SMC1A-204ENST00000463684 IGKV3-11P04433 115 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 HPNP05981 417 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 BMP7P18075 431 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 CXCR5P32302 372 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 CDK9P50750 372 aaKnown RBP13.25□□□□□ -0.29
SMC1A-204ENST00000463684 NTRK2Q16620 822 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 C18orf21Q32NC0 220 aaPredicted RBP13.25□□□□□ -0.29
SMC1A-204ENST00000463684 TEDDM1Q5T9Z0 273 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 TTC27Q6P3X3 843 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 VN1R5Q7Z5H4 357 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 LUZP2Q86TE4 346 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 PACS2Q86VP3 889 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 PPIL6Q8IXY8 311 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 TAGAPQ8N103 731 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 ACOT4Q8N9L9 421 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 ABTB1Q969K4 478 aaPredicted RBP13.25□□□□□ -0.29
SMC1A-204ENST00000463684 CERS2Q96G23 380 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 WDYHV1Q96HA8 205 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 FBXL20Q96IG2 436 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 EHD1Q9H4M9 534 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 GALNT8Q9NY28 637 aa13.25□□□□□ -0.29
SMC1A-204ENST00000463684 ZNF490Q9ULM2 529 aaPredicted RBP13.25□□□□□ -0.29
SMC1A-204ENST00000463684 ARHGAP21Q5T5U3 1957 aa13.24□□□□□ -0.29
SMC1A-204ENST00000463684 FGF17O60258 216 aa13.24□□□□□ -0.29
SMC1A-204ENST00000463684 ZNF37AP17032 561 aaPredicted RBP13.24□□□□□ -0.29
SMC1A-204ENST00000463684 FPR1P21462 350 aa13.24□□□□□ -0.29
SMC1A-204ENST00000463684 ATP5A1P25705 553 aaKnown RBP13.24□□□□□ -0.29
SMC1A-204ENST00000463684 SLC6A12P48065 614 aa13.24□□□□□ -0.29
SMC1A-204ENST00000463684 MASP1P48740 699 aa13.24□□□□□ -0.29
SMC1A-204ENST00000463684 PLIN5Q00G26 463 aa13.24□□□□□ -0.29
SMC1A-204ENST00000463684 HIST2H2ACQ16777 129 aaPredicted RBP13.24□□□□□ -0.29
SMC1A-204ENST00000463684 AP5B1Q2VPB7 878 aa13.24□□□□□ -0.29
SMC1A-204ENST00000463684 NHSL2Q5HYW2 709 aa13.24□□□□□ -0.29
SMC1A-204ENST00000463684 HIST2H2AA3Q6FI13 130 aa13.24□□□□□ -0.29
SMC1A-204ENST00000463684 RNF111Q6ZNA4 994 aa13.24□□□□□ -0.29
SMC1A-204ENST00000463684 ZPLD1Q8TCW7 415 aa13.24□□□□□ -0.29
SMC1A-204ENST00000463684 RHBDF1Q96CC6 855 aa13.24□□□□□ -0.29
SMC1A-204ENST00000463684 PTCD3Q96EY7 689 aaKnown RBP13.24□□□□□ -0.29
SMC1A-204ENST00000463684 GNRHR2Q96P88 292 aa13.24□□□□□ -0.29
SMC1A-204ENST00000463684 KRT12Q99456 494 aa13.24□□□□□ -0.29
SMC1A-204ENST00000463684 NAT9Q9BTE0 207 aa13.24□□□□□ -0.29
SMC1A-204ENST00000463684 SFXN3Q9BWM7 321 aa13.24□□□□□ -0.29
SMC1A-204ENST00000463684 UGT2B28Q9BY64 529 aa13.24□□□□□ -0.29
SMC1A-204ENST00000463684 SLC17A6Q9P2U8 582 aa13.24□□□□□ -0.29
SMC1A-204ENST00000463684 CTNNAL1Q9UBT7 734 aa13.24□□□□□ -0.29
SMC1A-204ENST00000463684 IKBKGQ9Y6K9 419 aa13.24□□□□□ -0.29
SMC1A-204ENST00000463684 EML6Q6ZMW3 1958 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 FBN1P35555 2871 aaKnown RBP13.23□□□□□ -0.29
SMC1A-204ENST00000463684 NCF1BA6NI72 391 aaPredicted RBP13.23□□□□□ -0.29
SMC1A-204ENST00000463684 NCF1CA8MVU1 366 aaPredicted RBP13.23□□□□□ -0.29
SMC1A-204ENST00000463684 HRKO00198 91 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 CYP4B1P13584 511 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 NCF1P14598 390 aaPredicted RBP13.23□□□□□ -0.29
SMC1A-204ENST00000463684 GCKP35557 465 aa13.23□□□□□ -0.29
SMC1A-204ENST00000463684 DIO3P55073 304 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms