RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 CMTM7Q96FZ5 175 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 PEX11GQ96HA9 241 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 GPR137Q96N19 417 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 CSF3RQ99062 836 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 TUBB6Q9BUF5 446 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 MRPL1Q9BYD6 325 aaKnown RBP13.73□□□□□ -0.21
NCK1-202ENST00000460960 HES7Q9BYE0 225 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 ACPTQ9BZG2 426 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 ELOVL6Q9H5J4 265 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 MEMO1Q9Y316 297 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 FIS1Q9Y3D6 152 aa13.73□□□□□ -0.21
NCK1-202ENST00000460960 LOC102723996A0A087X1L8 192 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 A0A1W2PQ72 361 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 BIRC5O15392 142 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 CDC123O75794 336 aaPredicted RBP13.72□□□□□ -0.21
NCK1-202ENST00000460960 ENO1P06733 434 aaKnown RBP13.72□□□□□ -0.21
NCK1-202ENST00000460960 ATP5A1P25705 553 aaKnown RBP13.72□□□□□ -0.21
NCK1-202ENST00000460960 HMOX2P30519 316 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 SERPINB1P30740 379 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 BSGP35613 385 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 XCR1P46094 333 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 HMGCS1Q01581 520 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 HHATQ5VTY9 493 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 TRIM40Q6P9F5 258 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 SPNS3Q6ZMD2 512 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 C3P1Q6ZMU1 363 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 REPS1Q96D71 796 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 C14orf79Q96F83 325 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 SORT1Q99523 831 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 TUBB1Q9H4B7 451 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 KCNK13Q9HB14 408 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 MCCC2Q9HCC0 563 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 LANCL2Q9NS86 450 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 ZDHHC2Q9UIJ5 367 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 SNX6Q9UNH7 406 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 SLC12A4Q9UP95 1085 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 GTF3C1Q12789 2109 aa13.72□□□□□ -0.21
NCK1-202ENST00000460960 TMPRSS11DO60235 418 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 PRKRAO75569 313 aaKnown RBP13.71□□□□□ -0.21
NCK1-202ENST00000460960 NADKO95544 446 aaPredicted RBP13.71□□□□□ -0.21
NCK1-202ENST00000460960 SERPINE1P05121 402 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 SLC18A1P54219 525 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 OC90Q02509 493 aaPredicted RBP13.71□□□□□ -0.21
NCK1-202ENST00000460960 GALNT1Q10472 559 aaPredicted RBP13.71□□□□□ -0.21
NCK1-202ENST00000460960 TBL3Q12788 808 aaKnown RBP13.71□□□□□ -0.21
NCK1-202ENST00000460960 OR1C1Q15619 314 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 UGT3A2Q3SY77 523 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 TMEM35AQ53FP2 167 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 KRTCAP3Q53RY4 240 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 ACER2Q5QJU3 275 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 TMEM205Q6UW68 189 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 LANCL3Q6ZV70 420 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 ACOT4Q8N9L9 421 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 THAP3Q8WTV1 239 aaPredicted RBP13.71□□□□□ -0.21
NCK1-202ENST00000460960 CA5BP1Q8WTZ4 195 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 UCN3Q969E3 161 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 SDCCAG3Q96C92 435 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 IMMP1LQ96LU5 166 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 ZNF354BQ96LW1 612 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 SIGLEC12Q96PQ1 595 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 KCNC2Q96PR1 638 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 MAPKAP1Q9BPZ7 522 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 UTP23Q9BRU9 249 aaKnown RBP13.71□□□□□ -0.21
NCK1-202ENST00000460960 VN1R1Q9GZP7 353 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 KCMF1Q9P0J7 381 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 ADGRE2Q9UHX3 823 aa13.71□□□□□ -0.21
NCK1-202ENST00000460960 URADA6NGE7 173 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 WASHC1A8K0Z3 465 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 HMGB1P1B2RPK0 211 aaPredicted RBP13.7□□□□□ -0.22
NCK1-202ENST00000460960 H3BQF6 201 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 TGFBR3LH3BV60 316 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 AZIN1O14977 448 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 ULK1O75385 1050 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 KRT6AP02538 564 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 KRT6BP04259 564 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 JUNP05412 331 aaKnown RBP13.7□□□□□ -0.22
NCK1-202ENST00000460960 CD46P15529 392 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 HIST1H1TP22492 207 aaPredicted RBP13.7□□□□□ -0.22
NCK1-202ENST00000460960 PTX3P26022 381 aaPredicted RBP13.7□□□□□ -0.22
NCK1-202ENST00000460960 SSR2P43308 183 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 KRT6CP48668 564 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 RAP1GDS1P52306 607 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 LIM2P55344 173 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 HNRNPH2P55795 449 aaKnown RBP13.7□□□□□ -0.22
NCK1-202ENST00000460960 ABCE1P61221 599 aaKnown RBP13.7□□□□□ -0.22
NCK1-202ENST00000460960 BTG2P78543 158 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 HSF1Q00613 529 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 BST1Q10588 318 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 ASPHQ12797 758 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 CUL3Q13618 768 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 TUBA3CQ13748 450 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 SH2D4BQ5SQS7 431 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 KANK2Q63ZY3 851 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 SPINK14Q6IE38 97 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 OR4C11Q6IEV9 310 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 TUBA3EQ6PEY2 450 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 CHSY3Q70JA7 882 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 CPEB2Q7Z5Q1 589 aaKnown RBP13.7□□□□□ -0.22
NCK1-202ENST00000460960 FAM47BQ8NA70 645 aa13.7□□□□□ -0.22
NCK1-202ENST00000460960 FAM98AQ8NCA5 519 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms