RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 RAB21Q9UL25 225 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 PSME2Q9UL46 239 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 ERVK-11Q9UQG0 969 aa16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 YARS2Q9Y2Z4 477 aaKnown RBP16.83■□□□□ 0.28
PDLIM2-215ENST00000456545 GNG14A0A1W2PPG7 69 aa16.82■□□□□ 0.28
PDLIM2-215ENST00000456545 C1orf226A1L170 272 aa16.82■□□□□ 0.28
PDLIM2-215ENST00000456545 WASHC1A8K0Z3 465 aa16.82■□□□□ 0.28
PDLIM2-215ENST00000456545 PGRMC2O15173 223 aa16.82■□□□□ 0.28
PDLIM2-215ENST00000456545 RGS16O15492 202 aaPredicted RBP16.82■□□□□ 0.28
PDLIM2-215ENST00000456545 CBX6O95503 412 aa16.82■□□□□ 0.28
PDLIM2-215ENST00000456545 SP1P08047 785 aa16.82■□□□□ 0.28
PDLIM2-215ENST00000456545 ALDH9A1P49189 494 aa16.82■□□□□ 0.28
PDLIM2-215ENST00000456545 ACSM2AQ08AH3 577 aa16.82■□□□□ 0.28
PDLIM2-215ENST00000456545 ZNF267Q14586 743 aaPredicted RBP16.82■□□□□ 0.28
PDLIM2-215ENST00000456545 ACSM2BQ68CK6 577 aa16.82■□□□□ 0.28
PDLIM2-215ENST00000456545 FRMD7Q6ZUT3 714 aa16.82■□□□□ 0.28
PDLIM2-215ENST00000456545 ASB15Q8WXK1 588 aa16.82■□□□□ 0.28
PDLIM2-215ENST00000456545 FAM111AQ96PZ2 611 aa16.82■□□□□ 0.28
PDLIM2-215ENST00000456545 CNPPD1Q9BV87 410 aa16.82■□□□□ 0.28
PDLIM2-215ENST00000456545 TMEM109Q9BVC6 243 aa16.82■□□□□ 0.28
PDLIM2-215ENST00000456545 MKS1Q9NXB0 559 aa16.82■□□□□ 0.28
PDLIM2-215ENST00000456545 ZNF223Q9UK11 482 aaPredicted RBP16.82■□□□□ 0.28
PDLIM2-215ENST00000456545 PCDHGB6Q9Y5F9 930 aa16.82■□□□□ 0.28
PDLIM2-215ENST00000456545 WWP2O00308 870 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 DDAH2O95865 285 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 SLC35E2P0CK97 266 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 EDN3P14138 238 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 CHN1P15882 459 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 TRHRP34981 398 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 HTR6P50406 440 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 XKP51811 444 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 TRA2BP62995 288 aaKnown RBP16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 RNF4P78317 190 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 HMGCS1Q01581 520 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 GALNT1Q10472 559 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 TBL3Q12788 808 aaKnown RBP16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 UBAP2LQ14157 1087 aaKnown RBP16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 SPIN4Q56A73 249 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 ZNF468Q5VIY5 522 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 FAM219BQ5XKK7 198 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 GALNTL5Q7Z4T8 443 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 FAM26EQ8N5C1 309 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 ZNF321PQ8N8H1 164 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 ST6GALNAC3Q8NDV1 305 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 MDS2Q8NDY4 140 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 TCP10LQ8TDR4 215 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 DOK4Q8TEW6 326 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 CHTF18Q8WVB6 975 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 UCN3Q969E3 161 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 SENP1Q9P0U3 644 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 MYOTQ9UBF9 498 aa16.81■□□□□ 0.28
PDLIM2-215ENST00000456545 SHANK1Q9Y566 2161 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 GOLGA6L10A6NI86 522 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 A8MVJ9 347 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 UBFD1O14562 309 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 PCDH7O60245 1069 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 PRKNO60260 465 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 ERLIN1O75477 346 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 ERAL1O75616 437 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 SLC25A12O75746 678 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 OR2J2O76002 312 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 AGFG2O95081 481 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 NT5EP21589 574 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 SERPINB3P29508 390 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 ERVK-8P63133 956 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 PCLAFQ15004 111 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 C16orf47Q6ZP98 133 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 SLC29A4Q7RTT9 530 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 CROCCP2Q86T23 111 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 CYP4Z2PQ8N1L4 340 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 OR8K3Q8NH51 312 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 ZNF721Q8TF20 911 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 TM4SF18Q96CE8 201 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 TAAR6Q96RI8 345 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 BARD1Q99728 777 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 GATA5Q9BWX5 397 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 HES7Q9BYE0 225 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 ACPTQ9BZG2 426 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 RRAGDQ9NQL2 400 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 PFDN4Q9NQP4 134 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 HPF1Q9NWY4 346 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 SLC17A7Q9P2U7 560 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 MCM8Q9UJA3 840 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 ERVK-19Q9WJR5 959 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 FIS1Q9Y3D6 152 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 PCDHA9Q9Y5H5 950 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 ZNF780BQ9Y6R6 833 aa16.8■□□□□ 0.28
PDLIM2-215ENST00000456545 HELZ2Q9BYK8 2649 aaKnown RBP16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 NEURL1O76050 574 aa16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 CHEK2O96017 543 aa16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 UROSP10746 265 aa16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 PORP16435 677 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 ALDH3A1P30838 453 aa16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 GALNSP34059 522 aa16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 HK2P52789 917 aa16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 FOXA1P55317 472 aa16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 PMP22Q01453 160 aa16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 CEP85LQ5SZL2 805 aa16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 IL20RBQ6UXL0 311 aa16.79■□□□□ 0.28
PDLIM2-215ENST00000456545 RNF111Q6ZNA4 994 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms