RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 SPACA6W5XKT8 324 aa21.28■■□□□ 1
PTPRA-208ENST00000455631 ARID1AO14497 2285 aa21.27■■□□□ 1
PTPRA-208ENST00000455631 TRIM64A6NGJ6 449 aa21.27■■□□□ 1
PTPRA-208ENST00000455631 TRIM64BA6NI03 449 aa21.27■■□□□ 1
PTPRA-208ENST00000455631 HRKO00198 91 aa21.27■■□□□ 1
PTPRA-208ENST00000455631 CASKO14936 926 aa21.27■■□□□ 1
PTPRA-208ENST00000455631 DYRK3O43781 588 aa21.27■■□□□ 1
PTPRA-208ENST00000455631 IL18BPO95998 194 aa21.27■■□□□ 1
PTPRA-208ENST00000455631 IGKV3-11P04433 115 aa21.27■■□□□ 1
PTPRA-208ENST00000455631 STT3AP46977 705 aa21.27■■□□□ 1
PTPRA-208ENST00000455631 KCNC1P48547 511 aa21.27■■□□□ 1
PTPRA-208ENST00000455631 HNMTP50135 292 aa21.27■■□□□ 1
PTPRA-208ENST00000455631 FRA10AC1Q70Z53 315 aa21.27■■□□□ 1
PTPRA-208ENST00000455631 YTHDF3Q7Z739 585 aaKnown RBP21.27■■□□□ 1
PTPRA-208ENST00000455631 LUZP2Q86TE4 346 aa21.27■■□□□ 1
PTPRA-208ENST00000455631 OR4N5Q8IXE1 308 aa21.27■■□□□ 1
PTPRA-208ENST00000455631 DIO2Q92813 273 aa21.27■■□□□ 1
PTPRA-208ENST00000455631 PIGTQ969N2 578 aa21.27■■□□□ 1
PTPRA-208ENST00000455631 ISL2Q96A47 359 aa21.27■■□□□ 1
PTPRA-208ENST00000455631 PDLIM5Q96HC4 596 aaKnown RBP21.27■■□□□ 1
PTPRA-208ENST00000455631 KCNC2Q96PR1 638 aa21.27■■□□□ 1
PTPRA-208ENST00000455631 F2RL3Q96RI0 385 aa21.27■■□□□ 1
PTPRA-208ENST00000455631 PIP5K1AQ99755 562 aa21.27■■□□□ 1
PTPRA-208ENST00000455631 PPANQ9NQ55 473 aaKnown RBP21.27■■□□□ 1
PTPRA-208ENST00000455631 TLN2Q9Y4G6 2542 aa21.26■□□□□ 0.99
PTPRA-208ENST00000455631 FGF17O60258 216 aa21.26■□□□□ 0.99
PTPRA-208ENST00000455631 TRIM3O75382 744 aaPredicted RBP21.26■□□□□ 0.99
PTPRA-208ENST00000455631 ACSL3O95573 720 aa21.26■□□□□ 0.99
PTPRA-208ENST00000455631 TMIGD3P0DMS9 266 aaPredicted RBP21.26■□□□□ 0.99
PTPRA-208ENST00000455631 ZNF37AP17032 561 aaPredicted RBP21.26■□□□□ 0.99
PTPRA-208ENST00000455631 CXCR5P32302 372 aa21.26■□□□□ 0.99
PTPRA-208ENST00000455631 CDKL1Q00532 357 aa21.26■□□□□ 0.99
PTPRA-208ENST00000455631 TBCELQ5QJ74 424 aa21.26■□□□□ 0.99
PTPRA-208ENST00000455631 VASNQ6EMK4 673 aa21.26■□□□□ 0.99
PTPRA-208ENST00000455631 ZNF793Q6ZN11 406 aa21.26■□□□□ 0.99
PTPRA-208ENST00000455631 SYDE1Q6ZW31 735 aaPredicted RBP21.26■□□□□ 0.99
PTPRA-208ENST00000455631 GALNT7Q86SF2 657 aa21.26■□□□□ 0.99
PTPRA-208ENST00000455631 NAT8LQ8N9F0 302 aa21.26■□□□□ 0.99
PTPRA-208ENST00000455631 C9orf106Q8NAJ2 232 aa21.26■□□□□ 0.99
PTPRA-208ENST00000455631 PPWD1Q96BP3 646 aaKnown RBP21.26■□□□□ 0.99
PTPRA-208ENST00000455631 ART5Q96L15 291 aa21.26■□□□□ 0.99
PTPRA-208ENST00000455631 PITHD1Q9GZP4 211 aaPredicted RBP21.26■□□□□ 0.99
PTPRA-208ENST00000455631 PRM3Q9NNZ6 103 aa21.26■□□□□ 0.99
PTPRA-208ENST00000455631 CORO1CQ9ULV4 474 aaPredicted RBP21.26■□□□□ 0.99
PTPRA-208ENST00000455631 OARD1Q9Y530 152 aa21.26■□□□□ 0.99
PTPRA-208ENST00000455631 CPN2P22792 545 aa21.25■□□□□ 0.99
PTPRA-208ENST00000455631 RPL21P46778 160 aaKnown RBP21.25■□□□□ 0.99
PTPRA-208ENST00000455631 SLC6A12P48065 614 aa21.25■□□□□ 0.99
PTPRA-208ENST00000455631 CDK9P50750 372 aaKnown RBP21.25■□□□□ 0.99
PTPRA-208ENST00000455631 RCAN2Q14206 197 aa21.25■□□□□ 0.99
PTPRA-208ENST00000455631 TOMM20Q15388 145 aa21.25■□□□□ 0.99
PTPRA-208ENST00000455631 SPANXN3Q5MJ09 141 aa21.25■□□□□ 0.99
PTPRA-208ENST00000455631 DCST1Q5T197 706 aa21.25■□□□□ 0.99
PTPRA-208ENST00000455631 DGAT2L6Q6ZPD8 337 aa21.25■□□□□ 0.99
PTPRA-208ENST00000455631 SLC29A4Q7RTT9 530 aa21.25■□□□□ 0.99
PTPRA-208ENST00000455631 DOK4Q8TEW6 326 aa21.25■□□□□ 0.99
PTPRA-208ENST00000455631 PERPQ96FX8 193 aa21.25■□□□□ 0.99
PTPRA-208ENST00000455631 CERS2Q96G23 380 aa21.25■□□□□ 0.99
PTPRA-208ENST00000455631 FBXL20Q96IG2 436 aa21.25■□□□□ 0.99
PTPRA-208ENST00000455631 UGT2B28Q9BY64 529 aa21.25■□□□□ 0.99
PTPRA-208ENST00000455631 ROGDIQ9GZN7 287 aa21.25■□□□□ 0.99
PTPRA-208ENST00000455631 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.25■□□□□ 0.99
PTPRA-208ENST00000455631 TRPS1Q9UHF7 1281 aa21.25■□□□□ 0.99
PTPRA-208ENST00000455631 COL6A5A8TX70 2615 aa21.24■□□□□ 0.99
PTPRA-208ENST00000455631 RTCAO00442 366 aaKnown RBP21.24■□□□□ 0.99
PTPRA-208ENST00000455631 BANF1O75531 89 aa21.24■□□□□ 0.99
PTPRA-208ENST00000455631 TTC4O95801 387 aa21.24■□□□□ 0.99
PTPRA-208ENST00000455631 HPNP05981 417 aa21.24■□□□□ 0.99
PTPRA-208ENST00000455631 BMP7P18075 431 aa21.24■□□□□ 0.99
PTPRA-208ENST00000455631 MASP1P48740 699 aa21.24■□□□□ 0.99
PTPRA-208ENST00000455631 PLIN5Q00G26 463 aa21.24■□□□□ 0.99
PTPRA-208ENST00000455631 NTRK2Q16620 822 aa21.24■□□□□ 0.99
PTPRA-208ENST00000455631 BICRALQ6AI39 1079 aa21.24■□□□□ 0.99
PTPRA-208ENST00000455631 PRSS57Q6UWY2 283 aa21.24■□□□□ 0.99
PTPRA-208ENST00000455631 ACOT4Q8N9L9 421 aa21.24■□□□□ 0.99
PTPRA-208ENST00000455631 C7orf57Q8NEG2 295 aa21.24■□□□□ 0.99
PTPRA-208ENST00000455631 MAGOHBQ96A72 148 aaKnown RBP21.24■□□□□ 0.99
PTPRA-208ENST00000455631 RHBDF1Q96CC6 855 aa21.24■□□□□ 0.99
PTPRA-208ENST00000455631 RBM18Q96H35 190 aaKnown RBP21.24■□□□□ 0.99
PTPRA-208ENST00000455631 WDYHV1Q96HA8 205 aa21.24■□□□□ 0.99
PTPRA-208ENST00000455631 CCL19Q99731 98 aa21.24■□□□□ 0.99
PTPRA-208ENST00000455631 WWTR1Q9GZV5 400 aa21.24■□□□□ 0.99
PTPRA-208ENST00000455631 CALHM2Q9HA72 323 aa21.24■□□□□ 0.99
PTPRA-208ENST00000455631 IQANK1A0A1B0GTG1 560 aa21.23■□□□□ 0.99
PTPRA-208ENST00000455631 NCF1BA6NI72 391 aaPredicted RBP21.23■□□□□ 0.99
PTPRA-208ENST00000455631 NCF1CA8MVU1 366 aaPredicted RBP21.23■□□□□ 0.99
PTPRA-208ENST00000455631 NCF1P14598 390 aaPredicted RBP21.23■□□□□ 0.99
PTPRA-208ENST00000455631 ATP5A1P25705 553 aaKnown RBP21.23■□□□□ 0.99
PTPRA-208ENST00000455631 HERVK_113P63132 956 aa21.23■□□□□ 0.99
PTPRA-208ENST00000455631 ERVK-8P63133 956 aa21.23■□□□□ 0.99
PTPRA-208ENST00000455631 IGLV3-21P80748 117 aaPredicted RBP21.23■□□□□ 0.99
PTPRA-208ENST00000455631 FOXF2Q12947 444 aa21.23■□□□□ 0.99
PTPRA-208ENST00000455631 NHSL2Q5HYW2 709 aa21.23■□□□□ 0.99
PTPRA-208ENST00000455631 UBE3DQ7Z6J8 389 aa21.23■□□□□ 0.99
PTPRA-208ENST00000455631 RILPQ96NA2 401 aa21.23■□□□□ 0.99
PTPRA-208ENST00000455631 ERVK-6Q9BXR3 956 aa21.23■□□□□ 0.99
PTPRA-208ENST00000455631 CAPS2Q9BXY5 557 aa21.23■□□□□ 0.99
PTPRA-208ENST00000455631 UBQLN3Q9H347 655 aa21.23■□□□□ 0.99
PTPRA-208ENST00000455631 GPRC5BQ9NZH0 403 aa21.23■□□□□ 0.99
PTPRA-208ENST00000455631 C6orf203Q9P0P8 240 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms