RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 RAD51BO15315 384 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 VEGFDO43915 354 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 MAGEC1O60732 1142 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 MTX2O75431 263 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 ERN1O75460 977 aaKnown RBP4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 AP2A2O94973 939 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 SNX4O95219 450 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 WNT11O96014 354 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 RBP1P09455 135 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 OR56A5P0C7T3 313 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 RALBP11234 206 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 CD1DP15813 335 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 ZNF37AP17032 561 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 ITGB6P18564 788 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 DRD4P21917 467 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 PRPH2P23942 346 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 GSTM2P28161 218 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 TEAD1P28347 426 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 ALDH3A1P30838 453 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 CCR7P32248 378 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 TRIM23P36406 574 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 RPS9P46781 194 aaKnown RBP4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 CLK3P49761 638 aaKnown RBP4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 KPNA2P52292 529 aaKnown RBP4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 CHN2P52757 468 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 ATP6V0D1P61421 351 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 SRSF3P84103 164 aaKnown RBP4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 ZXDAP98168 799 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 TAP2Q03519 686 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 GABPB1Q06547 395 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 ZNF273Q14593 569 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 OR4D1Q15615 310 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 TBR1Q16650 682 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 ACSBG2Q5FVE4 666 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 TECRLQ5HYJ1 363 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 CES4AQ5XG92 561 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 RAET1GQ6H3X3 334 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 GRHL2Q6ISB3 625 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 LRRC8EQ6NSJ5 796 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 KLC3Q6P597 504 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 TMEM88Q6PEY1 159 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 TMEM220Q6QAJ8 160 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 CYHR1Q6ZMK1 362 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 DET1Q7L5Y6 550 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 C10orf107Q8IVU9 208 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 CPNE9Q8IYJ1 553 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 LRRC34Q8IZ02 419 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 SPEM1Q8N4L4 309 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 ZBTB2Q8N680 514 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 CCDC63Q8NA47 563 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 TP53I13Q8NBR0 393 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 DENND6BQ8NEG7 585 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 DNAAF1Q8NEP3 725 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 TSPAN14Q8NG11 270 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 OR2T34Q8NGX1 318 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 RHEBL1Q8TAI7 183 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 RDH11Q8TC12 318 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 LKAAEAR1Q8TD35 194 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 SGCDQ92629 289 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 FUBP1Q96AE4 644 aaKnown RBP4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 CHMP6Q96FZ7 201 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 COX14Q96I36 57 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 CCT8L2Q96SF2 557 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 C1QTNF7Q9BXJ2 289 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 HDHD5Q9BXW7 423 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 TEX101Q9BY14 249 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 DERL2Q9GZP9 239 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 OR2AG1Q9H205 316 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 TFB2MQ9H5Q4 396 aaKnown RBP4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 ALG9Q9H6U8 611 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 SGK2Q9HBY8 427 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 CD93Q9NPY3 652 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 TRIM36Q9NQ86 728 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 KIAA1456Q9P272 454 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 COPG2Q9UBF2 871 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 MUTYHQ9UIF7 546 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 IKZF3Q9UKT9 509 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 LIPGQ9Y5X9 500 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 EML5Q05BV3 1969 aa4.95□□□□□ -1.62
HMGB1P4-201ENST00000455362 CACNA1HO95180 2353 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 PLXND1Q9Y4D7 1925 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 OR2AG2A6NM03 316 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 ANXA2P2A6NMY6 339 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 USP17L23D6RBM5 183 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 CDC7O00311 574 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 SLC31A1O15431 190 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 LATO43561 262 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 TRIAP1O43715 76 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 GPC4O75487 556 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 CDK14O94921 469 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 APBB3O95704 486 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 SEMA4FO95754 770 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 DDAH2O95865 285 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 FTH1P02794 183 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 PCCBP05166 539 aa4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 VIMP08670 466 aaKnown RBP4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 HOXC4P09017 264 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 ZNF888P0CJ79 500 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P4-201ENST00000455362 CBSLP0DN79 551 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms